RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 DRG1Q9Y295 367 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 RANBP2P49792 3224 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 DENND4CQ5VZ89 1909 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 DOCK6Q96HP0 2047 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ATG2AQ2TAZ0 1938 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 C2orf78A6NCI8 922 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 BHMG1C9JSJ3 638 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 PER2O15055 1255 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 MCF2LO15068 1137 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 CLASP2O75122 1294 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 LRIG2O94898 1065 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 APOEP02649 317 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 SRGAP2BP0DMP2 458 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 MYBL2P10244 700 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 EPCAMP16422 314 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 HCAR3P49019 387 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 CARSP49589 748 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 CLCN6P51797 869 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 GBE1Q04446 702 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 BRD3Q15059 726 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 RAB30Q15771 203 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 GLIPR1L2Q4G1C9 344 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 PDE12Q6L8Q7 609 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 B4GALNT4Q76KP1 1039 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 GSTA5Q7RTV2 222 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ZC3H18Q86VM9 953 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 GSPT2Q8IYD1 628 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 HS6ST3Q8IZP7 471 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ELMOD1Q8N336 334 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ARNTL2Q8WYA1 636 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TMEM121Q9BTD3 319 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 MAN1C1Q9NR34 630 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ARGLU1Q9NWB6 273 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 CCDC151A5D8V7 595 aa15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 GAS8O95995 478 aa15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 IGLV3-27P01718 113 aa15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 RBP3P10745 1247 aa15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ERCC2P18074 760 aa15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ZNF135P52742 658 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 LMNB2Q03252 620 aa15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 SLC10A2Q12908 348 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TRIP13Q15645 432 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 PABPC1LQ4VXU2 614 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 DUPD1Q68J44 220 aa15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 KLHDC10Q6PID8 442 aa15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 RBM23Q86U06 439 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ATP6V0D2Q8N8Y2 350 aa15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 RNF38Q9H0F5 515 aa15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 PRDM16Q9HAZ2 1276 aa15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 SLC12A6Q9UHW9 1150 aa15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 HS3ST4Q9Y661 456 aa15.24■□□□□ 0.03
CDK5RAP3-201ENST00000338399 H7C0C1 242 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 SGK1O00141 431 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 DCLK1O15075 740 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 RFPL2O75678 378 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 OAS1P00973 400 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ITGAVP06756 1048 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 GABRR2P28476 465 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 EPHB2P29323 1055 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ATP5OP48047 213 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TUBP50607 506 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 KCNQ1P51787 676 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 KPNA1P52294 538 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 RING1Q06587 406 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 PIK3R6Q5UE93 754 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 PRUNE1Q86TP1 453 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TMC8Q8IU68 726 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 CCDC33Q8N5R6 958 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ALLCQ8N6M5 410 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 SEC14L1Q92503 715 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 CORO1BQ9BR76 489 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 LRRC3Q9BY71 257 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 SLC28A3Q9HAS3 691 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TRPC7Q9HCX4 862 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 SNX24Q9Y343 169 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 HBS1LQ9Y450 684 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 CHD9Q3L8U1 2897 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 MFSD11O43934 449 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ERLIN1O75477 346 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 KRT14P02533 472 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TNFRSF8P28908 595 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 MLLT6P55198 1093 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 PTK6Q13882 451 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 RWDD4Q6NW29 188 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 DARS2Q6PI48 645 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 SYDE1Q6ZW31 735 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 GAREM2Q75VX8 874 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ADGRD2Q7Z7M1 963 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 C14orf80Q86SX3 495 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 NETO2Q8NC67 525 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 GDPD5Q8WTR4 605 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 LRRN4Q8WUT4 740 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 BTN2A3PQ96KV6 586 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 C1orf74Q96LT6 269 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 DTLQ9NZJ0 730 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 NFU1Q9UMS0 254 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 NEU2Q9Y3R4 380 aa15.23■□□□□ 0.03
CDK5RAP3-201ENST00000338399 LAMA3Q16787 3333 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 NUP205Q92621 2012 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 C1RP00736 705 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms