RNA–Protein interactions for RNA: ENST00000337303.8

PBRM1-202, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-202ENST00000337303 DYNC1LI2O43237 492 aaPredicted RBP6.96□□□□□ -1.3
PBRM1-202ENST00000337303 KATNA1O75449 491 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 KRT36O76013 467 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 NPTXRO95502 500 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 ARP10275 920 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 ITGALP20701 1170 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 RXRGP48443 463 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 ALDH6A1Q02252 535 aaKnown RBP6.96□□□□□ -1.3
PBRM1-202ENST00000337303 CDC16Q13042 620 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 KHDRBS2Q5VWX1 349 aaKnown RBP6.96□□□□□ -1.3
PBRM1-202ENST00000337303 MFSD14CQ5VZR4 134 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 ZCCHC23Q6ZST2 131 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 CCDC80Q76M96 950 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 KCNMB4Q86W47 210 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.96□□□□□ -1.3
PBRM1-202ENST00000337303 IQCKQ8N0W5 287 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 HTR3CQ8WXA8 447 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 FIG4Q92562 907 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 PHF21BQ96EK2 531 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 DEPDC7Q96QD5 511 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 CCDC28BQ9BUN5 200 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 SERHL2Q9H4I8 314 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 SERHLQ9NQF3 203 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 HPS4Q9NQG7 708 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 CCDC167Q9P0B6 97 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 ZNF70Q9UC06 446 aaPredicted RBP6.96□□□□□ -1.3
PBRM1-202ENST00000337303 DUSP12Q9UNI6 340 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 A0A087X0B3 334 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 TAF4O00268 1085 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 WFS1O76024 890 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 CYP1A1P04798 512 aaPredicted RBP6.96□□□□□ -1.3
PBRM1-202ENST00000337303 GCLCP48506 637 aaPredicted RBP6.96□□□□□ -1.3
PBRM1-202ENST00000337303 SLC11A2P49281 568 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 XIAPP98170 497 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 TOP3AQ13472 1001 aaPredicted RBP6.96□□□□□ -1.3
PBRM1-202ENST00000337303 TYW3Q6IPR3 259 aaKnown RBP6.96□□□□□ -1.3
PBRM1-202ENST00000337303 AAGABQ6PD74 315 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 SFRP1Q8N474 314 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 AMER2Q8N7J2 671 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 ZSWIM2Q8NEG5 633 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 FAM45AQ8TCE6 357 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 CAMKK2Q96RR4 588 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 LIMD1Q9UGP4 676 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 ANAPC2Q9UJX6 822 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 TRHDEQ9UKU6 1024 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 AK5Q9Y6K8 562 aa6.96□□□□□ -1.3
PBRM1-202ENST00000337303 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 FAM25AB3EWG3 89 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 FAM25CB3EWG5 89 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 FAM25GB3EWG6 89 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 C2CD2LO14523 706 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 OPLAHO14841 1288 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 HS6ST1O60243 411 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 PGM3O95394 542 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 PIGNO95427 931 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 SHBGP04278 402 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 ABCB1P08183 1280 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 ANPEPP15144 967 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 GPC1P35052 558 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 CHI3L1P36222 383 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 TCF7P36402 384 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 NUP62P37198 522 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 RPL14P50914 215 aaKnown RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 PKNOX1P55347 436 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 ZNF177Q13360 481 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 ORC1Q13415 861 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 MGAT5BQ3V5L5 792 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 PRR5LQ6MZQ0 368 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 ARCQ7LC44 396 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 PALB2Q86YC2 1186 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 SLC44A2Q8IWA5 706 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 KBTBD2Q8IY47 623 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 C8orf59Q8N0T1 100 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 ZSCAN18Q8TBC5 510 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 ACTRT2Q8TDY3 377 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 SEPT5Q99719 369 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 NUDT12Q9BQG2 462 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 NMRK2Q9NPI5 230 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 ZNRF3Q9ULT6 936 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 RNF17Q9BXT8 1623 aaKnown RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 PRR23AA6NEV1 266 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 PSMD12O00232 456 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 GSTM1P09488 218 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 SUPT20HL2P0C7V6 817 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 SLC2A4P14672 509 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 HNRNPH3P31942 346 aaKnown RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 MAGEA10P43363 369 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 CAPZA2P47755 286 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 CSE1LP55060 971 aaKnown RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 AMPD2Q01433 879 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 PGS1Q32NB8 556 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 USP39Q53GS9 565 aaKnown RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 EARS2Q5JPH6 523 aaKnown RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 DUPD1Q68J44 220 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 CDH24Q86UP0 819 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 CYP4Z2PQ8N1L4 340 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 FBXO39Q8N4B4 442 aa6.95□□□□□ -1.3
PBRM1-202ENST00000337303 BHLHE22Q8NFJ8 381 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 WDR36Q8NI36 951 aaKnown RBP6.95□□□□□ -1.3
PBRM1-202ENST00000337303 ITFG1Q8TB96 612 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms