RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 GLUD1P00367 558 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 CYBBP04839 570 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 APRTP07741 180 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 MBL2P11226 248 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-201ENST00000334136 EPHB2P29323 1055 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 VHLP40337 213 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 C1QBPQ07021 282 aaKnown RBP12.16□□□□□ -0.46
HDAC6-201ENST00000334136 DUSP4Q13115 394 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 HIC1Q14526 733 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 TAF1BQ53T94 588 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-201ENST00000334136 C1orf228Q6PIY5 440 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 BZW1Q7L1Q6 419 aaKnown RBP12.16□□□□□ -0.46
HDAC6-201ENST00000334136 PIGZQ86VD9 579 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 PLEKHO2Q8TD55 490 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 ATXN3LQ9H3M9 355 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 NRDE2Q9H7Z3 1164 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 APOBEC3GQ9HC16 384 aaKnown RBP12.16□□□□□ -0.46
HDAC6-201ENST00000334136 ZNF711Q9Y462 761 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 GREB1LQ9C091 1923 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-201ENST00000334136 E2F8A0AVK6 867 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 MEIS3P2A8K0S8 358 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 STK25O00506 426 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 PPEF2O14830 753 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 SHOX2O60902 331 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-201ENST00000334136 CILPO75339 1184 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 SPATA31D3P0C874 917 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 AVPR1AP37288 418 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 PRKCIP41743 596 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 SLC11A1P49279 550 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 EFEMP1Q12805 493 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 CYTH1Q15438 398 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 RAB30Q15771 203 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 TMEM259Q4ZIN3 620 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 SPATA31D4Q6ZUB0 917 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 EMC1Q8N766 993 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 ZMAT2Q96NC0 199 aaKnown RBP12.16□□□□□ -0.46
HDAC6-201ENST00000334136 SPON2Q9BUD6 331 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 KLC2Q9H0B6 622 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 WWP1Q9H0M0 922 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 PTPRHQ9HD43 1115 aa12.16□□□□□ -0.46
HDAC6-201ENST00000334136 SNX3O60493 162 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 HNRNPCP07910 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
HDAC6-201ENST00000334136 DRD4P21917 467 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 EEF1B2P24534 225 aaKnown RBP12.15□□□□□ -0.46
HDAC6-201ENST00000334136 TKTP29401 623 aaKnown RBP12.15□□□□□ -0.46
HDAC6-201ENST00000334136 FNTAP49354 379 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 PPP1R26Q5T8A7 1209 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-201ENST00000334136 ZNF280BQ86YH2 543 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 RYBPQ8N488 228 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-201ENST00000334136 TEX9Q8N6V9 391 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 ICA1LQ8NDH6 482 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 EDEM1Q92611 657 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 FAM111AQ96PZ2 611 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 TMEM175Q9BSA9 504 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 OSBPL7Q9BZF2 842 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 ULBP1Q9BZM6 244 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 DDX56Q9NY93 547 aaKnown RBP12.15□□□□□ -0.46
HDAC6-201ENST00000334136 TLK1Q9UKI8 766 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 NBNO60934 754 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 TYMPP19971 482 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 YWHAZP63104 245 aaKnown RBP12.15□□□□□ -0.46
HDAC6-201ENST00000334136 ZNF268Q14587 947 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-201ENST00000334136 FAM35AQ86V20 835 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 MCOLN2Q8IZK6 566 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 TTC13Q8NBP0 860 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 HSFY1Q96LI6 401 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 THEGQ9P2T0 379 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 STXBP5LQ9Y2K9 1186 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 GRIN2DO15399 1336 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 E5RJQ4 531 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 F9P00740 461 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 RARAP10276 462 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 RPL17P18621 184 aaKnown RBP12.15□□□□□ -0.46
HDAC6-201ENST00000334136 GPM6BQ13491 265 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 PRSS55Q6UWB4 352 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-201ENST00000334136 ANKRD33Q7Z3H0 272 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 MREGQ8N565 214 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 CXorf38Q8TB03 319 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 RXFP2Q8WXD0 754 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 NSL1Q96IY1 281 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 TCF25Q9BQ70 676 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 ACBD6Q9BR61 282 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 TAS2R14Q9NYV8 317 aa12.15□□□□□ -0.46
HDAC6-201ENST00000334136 UXTQ9UBK9 157 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-201ENST00000334136 BNIP3LO60238 219 aa12.15□□□□□ -0.47
HDAC6-201ENST00000334136 USP17L7P0C7H9 530 aa12.15□□□□□ -0.47
HDAC6-201ENST00000334136 ATP6V1B1P15313 513 aa12.15□□□□□ -0.47
HDAC6-201ENST00000334136 EIF3EP60228 445 aaKnown RBP12.15□□□□□ -0.47
HDAC6-201ENST00000334136 PHEXP78562 749 aa12.15□□□□□ -0.47
HDAC6-201ENST00000334136 SMARCB1Q12824 385 aa12.15□□□□□ -0.47
HDAC6-201ENST00000334136 DDR2Q16832 855 aa12.15□□□□□ -0.47
HDAC6-201ENST00000334136 CES5AQ6NT32 575 aa12.15□□□□□ -0.47
HDAC6-201ENST00000334136 LLGL2Q6P1M3 1020 aa12.15□□□□□ -0.47
HDAC6-201ENST00000334136 PGM2Q96G03 612 aa12.15□□□□□ -0.47
HDAC6-201ENST00000334136 VCPIP1Q96JH7 1222 aa12.15□□□□□ -0.47
HDAC6-201ENST00000334136 WDCPQ9H6R7 721 aa12.15□□□□□ -0.47
HDAC6-201ENST00000334136 SUDS3Q9H7L9 328 aaPredicted RBP12.15□□□□□ -0.47
HDAC6-201ENST00000334136 MANSC1Q9H8J5 431 aa12.15□□□□□ -0.47
HDAC6-201ENST00000334136 RAB6BQ9NRW1 208 aa12.15□□□□□ -0.47
HDAC6-201ENST00000334136 SLC8A2Q9UPR5 921 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms