RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 SKA1Q96BD8 255 aa12.15□□□□□ -0.47
EFCAB13-201ENST00000331493 CSPG4P5Q96PW8 444 aa12.15□□□□□ -0.47
EFCAB13-201ENST00000331493 KCTD15Q96SI1 283 aaPredicted RBP12.15□□□□□ -0.47
EFCAB13-201ENST00000331493 PPM1HQ9ULR3 514 aa12.15□□□□□ -0.47
EFCAB13-201ENST00000331493 MFSD11O43934 449 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 TRPA1O75762 1119 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 WFS1O76024 890 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 RALBP11234 206 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 IREB2P48200 963 aaKnown RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 R3HDM1Q15032 1099 aaKnown RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 LCLAT1Q6UWP7 414 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 BEST2Q8NFU1 509 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 PIP4K2CQ8TBX8 421 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 USP13Q92995 863 aaPredicted RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 PTCD3Q96EY7 689 aaKnown RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 ZNF333Q96JL9 665 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 BCO2Q9BYV7 579 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 FRMD8P1Q9BZ68 369 aaPredicted RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 ATXN3LQ9H3M9 355 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 CYP3A43Q9HB55 503 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 KCNK4Q9NYG8 393 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 TMEM216Q9P0N5 145 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 CORO1CQ9ULV4 474 aaPredicted RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 C2CD2Q9Y426 696 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 SNX10Q9Y5X0 201 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 DYNC1LI2O43237 492 aaPredicted RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 HNRNPCL1O60812 293 aaKnown RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 ENO3P13929 434 aaPredicted RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 ANPEPP15144 967 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 DPY19L2Q6NUT2 758 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 PIWIL2Q8TC59 973 aaKnown RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 ZNF184Q99676 751 aaPredicted RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 CYLDQ9NQC7 956 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 DTLQ9NZJ0 730 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 LRCH1Q9Y2L9 728 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 IGKV6D-21A0A0A0MT36 114 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 ABLIM1O14639 778 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 PHGDHO43175 533 aaKnown RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 HUS1O60921 280 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 MCF2P10911 925 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 SOX11P35716 441 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 COPAP53621 1224 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 MAP3K7CLP57077 242 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 SNX16P57768 344 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 SLC18A2Q05940 514 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 CES4AQ5XG92 561 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 HPS6Q86YV9 775 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 EXOC8Q8IYI6 725 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 ADGRF2Q8IZF7 708 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 ZNF398Q8TD17 642 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 P2RY11Q96G91 374 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 ZMAT2Q96NC0 199 aaKnown RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 AGAP2Q99490 1192 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 OXCT2Q9BYC2 517 aaPredicted RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 ASB7Q9H672 318 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 WDR55Q9H6Y2 383 aaPredicted RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 C20orf96Q9NUD7 363 aaPredicted RBP12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 THAP1Q9NVV9 213 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 ADAMTS5Q9UNA0 930 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 LRRC42Q9Y546 428 aa12.14□□□□□ -0.47
EFCAB13-201ENST00000331493 MAP3K13O43283 966 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 TGM2P21980 687 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 PTPN7P35236 360 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 SLC18A1P54219 525 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 DEUP1Q05D60 604 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 POU5F1BQ06416 359 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 SEPT6Q14141 434 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 PRAMEF19Q5SWL8 479 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 SLC30A9Q6PML9 568 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 ZNF276Q8N554 614 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 SIGLEC10Q96LC7 697 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 FGD4Q96M96 766 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 PANX3Q96QZ0 392 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 GBA2Q9HCG7 927 aaPredicted RBP12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 GPRC5DQ9NZD1 345 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 BRWD3Q6RI45 1802 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 SMAPO00193 183 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 EEF2KO00418 725 aaKnown RBP12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 RECQL4O94761 1208 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 SP100P23497 879 aaPredicted RBP12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 CCR10P46092 362 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 STILQ15468 1287 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 SPDYAQ5MJ70 313 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 CDCA2Q69YH5 1023 aaPredicted RBP12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 PDPK2PQ6A1A2 396 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 TWF2Q6IBS0 349 aaKnown RBP12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 C12orf42Q96LP6 360 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 TASP1Q9H6P5 420 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 LNPEPQ9UIQ6 1025 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 SOX13Q9UN79 622 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 GAS2O43903 313 aaKnown RBP12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 C22orf31O95567 290 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 ITGA2BP08514 1039 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 GARSP41250 739 aaKnown RBP12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 NUDT2P50583 147 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 PKNOX1P55347 436 aa12.13□□□□□ -0.47
EFCAB13-201ENST00000331493 PDE1CQ14123 709 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms