RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 CCNG1P51959 295 aa14.47□□□□□ -0.09
ATP2C1-201ENST00000328560 POU5F1BQ06416 359 aa14.47□□□□□ -0.09
ATP2C1-201ENST00000328560 KRT72Q14CN4 511 aa14.47□□□□□ -0.09
ATP2C1-201ENST00000328560 PPFIBP2Q8ND30 876 aa14.47□□□□□ -0.09
ATP2C1-201ENST00000328560 GCOM2Q9BZD3 368 aaPredicted RBP14.47□□□□□ -0.09
ATP2C1-201ENST00000328560 CIB2O75838 187 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 STK10O94804 968 aaKnown RBP14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 SETSIPP0DME0 302 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 TYK2P29597 1187 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 CRHR1P34998 444 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 SERPINB9P50453 376 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 BCAT1P54687 386 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 FBXO47Q5MNV8 452 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 C9orf57Q5W0N0 161 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 WDR75Q8IWA0 830 aaKnown RBP14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 ANKRD52Q8NB46 1076 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 PPTC7Q8NI37 304 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 NRG4Q8WWG1 115 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 ATP2A3Q93084 1043 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 QKIQ96PU8 341 aaKnown RBP eCLIP14.46□□□□□ -0.093e-6■■■■□ 21.4
ATP2C1-201ENST00000328560 XPNPEP3Q9NQH7 507 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 ZNF358Q9NW07 568 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 ZFATQ9P243 1243 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 PIN4Q9Y237 131 aaKnown RBP14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 A0A0A0MRY4 1105 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 CCL15-CCL14A0A0B4J2E2 113 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 E7ENQ6 273 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 KLF11O14901 512 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 SPTLC1O15269 473 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 SMNDC1O75940 238 aaKnown RBP eCLIP14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 HOXA11P31270 313 aaPredicted RBP14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 NDUFV1P49821 464 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 CCL15Q16663 113 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 C6orf163Q5TEZ5 329 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 C1orf146Q5VVC0 180 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 LRRC74BQ6ZQY2 392 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 SLC26A9Q7LBE3 791 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 P2RY11Q96G91 374 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 SPATA13Q96N96 652 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 GJD2Q9UKL4 321 aa14.46□□□□□ -0.09
ATP2C1-201ENST00000328560 M0QYT0 321 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 C6orf222P0C671 652 aaPredicted RBP14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 SLC34A1Q06495 639 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 DGKDQ16760 1214 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 MARCH8Q5T0T0 291 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 SLC27A1Q6PCB7 646 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 CMC1Q7Z7K0 106 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 PIGZQ86VD9 579 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 RASSF3Q86WH2 238 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 TMPRSS6Q8IU80 811 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 SCUBE1Q8IWY4 988 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 HACE1Q8IYU2 909 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 HIPK4Q8NE63 616 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 APOL2Q9BQE5 337 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 RNF39Q9H2S5 420 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 PRDM12Q9H4Q4 367 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 ARHGEF4Q9NR80 690 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 SYBUQ9NX95 663 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 CACNG4Q9UBN1 327 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 RPS6KL1Q9Y6S9 549 aa14.46□□□□□ -0.1
ATP2C1-201ENST00000328560 LOC100653049A0A140TA62 436 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 KPNA7A9QM74 516 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 STRNO43815 780 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 KRT34O76011 436 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 NCF2P19878 526 aaPredicted RBP14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 TPSB2P20231 275 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 SAT1P21673 171 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 NR2C2P49116 596 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 EPHB1P54762 984 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 IFRD2Q12894 506 aaPredicted RBP14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 TPSAB1Q15661 275 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 TMEM154Q6P9G4 183 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 PACS1Q6VY07 963 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 IFNLR1Q8IU57 520 aaPredicted RBP14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 LINC01465Q8N7H1 131 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 DNAAF3Q8N9W5 541 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 ZC3H15Q8WU90 426 aaKnown RBP14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 UCMAQ8WVF2 138 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 SNX27Q96L92 541 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 MED10Q9BTT4 135 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 CYP4F11Q9HBI6 524 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 ACSS2Q9NR19 701 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 THAP1Q9NVV9 213 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 KLHL8Q9P2G9 620 aaPredicted RBP14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 TAGLN3Q9UI15 199 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 ANK1P16157 1881 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 DYNC1LI2O43237 492 aaPredicted RBP14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 KIF1CO43896 1103 aaKnown RBP14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 ALDOAP04075 364 aaKnown RBP14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 CCNFP41002 786 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 PTPN9P43378 593 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 SLC25A3Q00325 362 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 SEMA5AQ13591 1074 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 PDE1CQ14123 709 aaPredicted RBP14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 TEX44Q53QW1 395 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 VWA5B1Q5TIE3 1220 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 APPL2Q8NEU8 664 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 AZIN2Q96A70 460 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 LRRC4Q9HBW1 653 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 PNPOQ9NVS9 261 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms