RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 OR5B17Q8NGF7 314 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 MAPK15Q8TD08 544 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 ACMSDQ8TDX5 336 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 FNIP1Q8TF40 1166 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 DEPDC1BQ8WUY9 529 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 RTP4Q96DX8 246 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 ZNF597Q96LX8 424 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 NUF2Q9BZD4 464 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 HAPLN2Q9GZV7 340 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 RNPEPQ9H4A4 650 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 OLAHQ9NV23 265 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 SLC38A7Q9NVC3 462 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 EBF1Q9UH73 591 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 UBIAD1Q9Y5Z9 338 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 TMEM247A6NEH6 219 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 H7C0C1 242 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 TPP1O14773 563 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 E2F6O75461 281 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 APRTP07741 180 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 CNTFP26441 200 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 PIK3R1P27986 724 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 ADORA2AP29274 412 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 MIPP30301 263 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 ATP5OP48047 213 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 PKNOX1P55347 436 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 RAB15P59190 212 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 TUBA4AP68366 448 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 SNX32Q86XE0 403 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 TFAP2BQ92481 460 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 DLG3Q92796 817 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 EBNA1BP2Q99848 306 aaKnown RBP13.13□□□□□ -0.31
CCDC60-201ENST00000327554 BRD8Q9H0E9 1235 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 TUT1Q9H6E5 874 aaKnown RBP13.13□□□□□ -0.31
CCDC60-201ENST00000327554 RMI1Q9H9A7 625 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 RSAD1Q9HA92 442 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 RBAKQ9NYW8 714 aaPredicted RBP13.13□□□□□ -0.31
CCDC60-201ENST00000327554 SLC17A6Q9P2U8 582 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 AHDC1Q5TGY3 1603 aaPredicted RBP13.13□□□□□ -0.31
CCDC60-201ENST00000327554 FUOMA2VDF0 154 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 H0YJX3 145 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 FBP2O00757 339 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 KCNN4O15554 427 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 ADAM23O75077 832 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 BCAS2O75934 225 aaPredicted RBP13.13□□□□□ -0.31
CCDC60-201ENST00000327554 BBOX1O75936 387 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 CCNE2O96020 404 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 RALBP11234 206 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 SERPINB5P36952 375 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 DPP6P42658 865 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 HSD17B4P51659 736 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 MRPS9P82933 396 aaKnown RBP13.13□□□□□ -0.31
CCDC60-201ENST00000327554 NRF1Q16656 503 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 ZNF394Q53GI3 561 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 ZBTB41Q5SVQ8 909 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 UNC5BQ8IZJ1 945 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 MCUQ8NE86 351 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 ZDHHC15Q96MV8 337 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 OR52B2Q96RD2 323 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 HNRNPABQ99729 332 aaKnown RBP13.13□□□□□ -0.31
CCDC60-201ENST00000327554 CDH19Q9H159 772 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 CAAP1Q9H8G2 361 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 MOCS1Q9NZB8 636 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 COPG2Q9UBF2 871 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 DOLKQ9UPQ8 538 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 MYRFQ9Y2G1 1151 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 COQ6Q9Y2Z9 468 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 PCDHA11Q9Y5I1 949 aa13.13□□□□□ -0.31
CCDC60-201ENST00000327554 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.13□□□□□ -0.31
CCDC60-201ENST00000327554 FER1L6Q2WGJ9 1857 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 ARHGEF37A1IGU5 675 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 HTR3EA5X5Y0 456 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 MATN2O00339 956 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 ACOT8O14734 319 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 ENDOD1O94919 500 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 BMP10O95393 424 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 TRUB2O95900 331 aaKnown RBP13.12□□□□□ -0.31
CCDC60-201ENST00000327554 HSPA1LP34931 641 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 LIG4P49917 911 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 ATXN3P54252 364 aaPredicted RBP13.12□□□□□ -0.31
CCDC60-201ENST00000327554 METTL21CQ5VZV1 264 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 GPR180Q86V85 440 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 LDHDQ86WU2 507 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 RNF148Q8N7C7 305 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 ZNF781Q8N8C0 355 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 ACER1Q8TDN7 264 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 PDCD6IPQ8WUM4 868 aaKnown RBP13.12□□□□□ -0.31
CCDC60-201ENST00000327554 SLC7A3Q8WY07 619 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 ISOC1Q96CN7 298 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 PEBP4Q96S96 227 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 CGRRF1Q99675 332 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 IDI2Q9BXS1 227 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 DEFB129Q9H1M3 183 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 SELENONQ9NZV5 590 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 BCAP29Q9UHQ4 241 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 CYTH4Q9UIA0 394 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 AGO2Q9UKV8 859 aaKnown RBP13.12□□□□□ -0.31
CCDC60-201ENST00000327554 CDH7Q9ULB5 785 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 PCDHGC3Q9UN70 934 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 PCDHB12Q9Y5F1 795 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 NRXN2Q9P2S2 1712 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms