RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 CNGB3Q9NQW8 809 aa8.46□□□□□ -1.05
CCNC-201ENST00000326298 ITM2CQ9NQX7 267 aa8.46□□□□□ -1.05
CCNC-201ENST00000326298 ABCC13Q9NSE7 274 aa8.46□□□□□ -1.05
CCNC-201ENST00000326298 USP36Q9P275 1121 aaKnown RBP8.46□□□□□ -1.05
CCNC-201ENST00000326298 ANGPTL2Q9UKU9 493 aa8.46□□□□□ -1.05
CCNC-201ENST00000326298 STRIP2Q9ULQ0 834 aa8.46□□□□□ -1.05
CCNC-201ENST00000326298 PAPSS1O43252 624 aaPredicted RBP8.46□□□□□ -1.06
CCNC-201ENST00000326298 LTFP02788 710 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 SETSIPP0DME0 302 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 CD59P13987 128 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 TBXAS1P24557 533 aaPredicted RBP8.46□□□□□ -1.06
CCNC-201ENST00000326298 ACSL1P33121 698 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 CTSOP43234 321 aaPredicted RBP8.46□□□□□ -1.06
CCNC-201ENST00000326298 SEMA3BQ13214 749 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 BECN1Q14457 450 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 ST3GAL2Q16842 350 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 ADGRF1Q5T601 910 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 PIK3R6Q5UE93 754 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 MSANTD2Q6P1R3 559 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 CHST9Q7L1S5 443 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 KIAA0907Q7Z7F0 614 aaPredicted RBP8.46□□□□□ -1.06
CCNC-201ENST00000326298 PIP4P1Q86T03 277 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 TADA2BQ86TJ2 420 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 C11orf74Q86VG3 221 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 ELOA2Q8IYF1 753 aaPredicted RBP8.46□□□□□ -1.06
CCNC-201ENST00000326298 ARHGAP18Q8N392 663 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 MINDY1Q8N5J2 469 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 DQX1Q8TE96 717 aaKnown RBP8.46□□□□□ -1.06
CCNC-201ENST00000326298 RNF139Q8WU17 664 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 DDX1Q92499 740 aaKnown RBP8.46□□□□□ -1.06
CCNC-201ENST00000326298 TMA16Q96EY4 203 aaKnown RBP8.46□□□□□ -1.06
CCNC-201ENST00000326298 FCRL2Q96LA5 508 aaPredicted RBP8.46□□□□□ -1.06
CCNC-201ENST00000326298 CDK5RAP1Q96SZ6 601 aaKnown RBP8.46□□□□□ -1.06
CCNC-201ENST00000326298 ADAM33Q9BZ11 813 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 DCLK3Q9C098 648 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 TMEM245Q9H330 911 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 UBE2TQ9NPD8 197 aaPredicted RBP8.46□□□□□ -1.06
CCNC-201ENST00000326298 STIM2Q9P246 746 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 CNTN6Q9UQ52 1028 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 ZNF510Q9Y2H8 683 aa8.46□□□□□ -1.06
CCNC-201ENST00000326298 E5RJQ4 531 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 TBL1XO60907 577 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 GJB3O75712 270 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 LETM1O95202 739 aaPredicted RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 SERPINF2P08697 491 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 CD6P30203 668 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 RPL34P49207 117 aaKnown RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 HARS2P49590 506 aaKnown RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 MARSP56192 900 aaKnown RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 SLC8A3P57103 927 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 SHC2P98077 582 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 PAK1Q13153 545 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 HSP90AA4PQ58FG1 418 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 DAB2IPQ5VWQ8 1189 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 SDE2Q6IQ49 451 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 SERPINA13PQ6UXR4 307 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 NUDT18Q6ZVK8 323 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 TAC4Q86UU9 113 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 ZCCHC9Q8N567 271 aaKnown RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 C1orf216Q8TAB5 229 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 NUSAP1Q9BXS6 441 aaKnown RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 FAM124BQ9H5Z6 455 aaPredicted RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 C6orf106Q9H6K1 298 aaPredicted RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 ST7Q9NRC1 585 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 SERGEFQ9UGK8 458 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 GGA2Q9UJY4 613 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 SLC6A14Q9UN76 642 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 HBS1LQ9Y450 684 aaKnown RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 ARHGAP33O14559 1287 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 HYAL3O43820 417 aaPredicted RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 ZNF217O75362 1048 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 MOCS2O96007 188 aaPredicted RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 AFPP02771 609 aaKnown RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 KRT5P13647 590 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 IRAK1P51617 712 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 TBX4P57082 545 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 GCNT1Q02742 428 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 DUOXA1Q1HG43 343 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 PREPLQ4J6C6 727 aaPredicted RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 MPPE1Q53F39 396 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 KCNT1Q5JUK3 1230 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 SPDYCQ5MJ68 293 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 MBLAC2Q68D91 279 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 DPY19L2P1Q6NXN4 242 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 CIR1Q86X95 450 aaPredicted RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 PASD1Q8IV76 773 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 RGL4Q8IZJ4 473 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 SCML4Q8N228 414 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 ZNF606Q8WXB4 792 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 SIPA1Q96FS4 1042 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 SLC39A13Q96H72 371 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 CCDC34Q96HJ3 373 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 SCNM1Q9BWG6 230 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 GTPBP4Q9BZE4 634 aaKnown RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 PRSS16Q9NQE7 514 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 EIF2B4Q9UI10 523 aaKnown RBP8.45□□□□□ -1.06
CCNC-201ENST00000326298 KIAA1257Q9ULG3 409 aa8.45□□□□□ -1.06
CCNC-201ENST00000326298 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCNC-201ENST00000326298 KCNK3O14649 394 aa8.44□□□□□ -1.06
CCNC-201ENST00000326298 SH3BP5O60239 455 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms