RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 OR6P1Q8NGX9 317 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 USP6NLQ92738 828 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 MIPEPQ99797 713 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 CPNE1Q99829 537 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 VANGL2Q9ULK5 521 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 M0QYT0 321 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 MTSS1O43312 755 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 GRIN3BO60391 1043 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 T-ENOLP0DO92 83 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 VAV1P15498 845 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 KCNA2P16389 499 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 VCLP18206 1134 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 PTPN7P35236 360 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 PRKAA1Q13131 559 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 NAB1Q13506 487 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 NAPEPLDQ6IQ20 393 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 PLD5Q8N7P1 536 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 PCYOX1LQ8NBM8 494 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 DNERQ8NFT8 737 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 TRAPPC12Q8WVT3 735 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 ERAP1Q9NZ08 941 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 ITGA11Q9UKX5 1188 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 A0A0A0MRY4 1105 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 M0QZ92 97 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 KCNK1O00180 336 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 LGR5O75473 907 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 ITGA2BP08514 1039 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 NFICP08651 508 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 IL1R2P27930 398 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 EEF1DP29692 281 aaKnown RBP13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 OAZ1P54368 228 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 KDELC2Q7Z4H8 507 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 HPS6Q86YV9 775 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 APPL2Q8NEU8 664 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 PPHLN1Q8NEY8 458 aaKnown RBP13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 SLC7A14Q8TBB6 771 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 SPATA13Q96N96 652 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 ASB7Q9H672 318 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 PCDH18Q9HCL0 1135 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 WARS2Q9UGM6 360 aaKnown RBP13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 SUN2Q9UH99 717 aa13.08□□□□□ -0.32
DNMT3A-202ENST00000321117 SPATA31C2B4DYI2 1134 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 SIN3BO75182 1162 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 SUPT3HO75486 399 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 MPOP05164 745 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 DLDP09622 509 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 GNL1P36915 607 aaPredicted RBP13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 ABCG1P45844 678 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 NEK3P51956 506 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 SLC5A9Q2M3M2 681 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 PACS1Q6VY07 963 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 APOBEC3FQ8IUX4 373 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 CPB2Q96IY4 423 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 EBF3Q9H4W6 596 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 DHX33Q9H6R0 707 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 NMRAL1Q9HBL8 299 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 RIPK3Q9Y572 518 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 PAPPAQ13219 1627 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 LAMB1P07942 1786 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 C15orf38-AP3S2A0A0A6YYH1 394 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 DFFAO00273 331 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 GNGT2O14610 69 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 ANGPT2O15123 496 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 BCAT1P54687 386 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 PLOD1Q02809 727 aaPredicted RBP13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 USP4Q13107 963 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 DALRD3Q5D0E6 543 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 NBPF12Q5TAG4 269 aaPredicted RBP13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 ARPINQ7Z6K5 226 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 SLC4A11Q8NBS3 891 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 SKA1Q96BD8 255 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 EBF4Q9BQW3 602 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 ZNF670Q9BS34 389 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 PIM2Q9P1W9 311 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 ACOT9Q9Y305 439 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 CAPN8A6NHC0 703 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 A6NHS1 94 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 USP12O75317 370 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 UBA1P22314 1058 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 SLC18A2Q05940 514 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 CXCL9Q07325 125 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 PPIDQ08752 370 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 SLC12A1Q13621 1099 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 SPANXN3Q5MJ09 141 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 TTC33Q6PID6 262 aaPredicted RBP13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 FAM81AQ8TBF8 368 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 TUBGCP5Q96RT8 1024 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 TBC1D23Q9NUY8 699 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 BTBD7Q9P203 1132 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 CDH22Q9UJ99 828 aa13.07□□□□□ -0.32
DNMT3A-202ENST00000321117 MYH14Q7Z406 1995 aaKnown RBP13.06□□□□□ -0.32
DNMT3A-202ENST00000321117 A0A087WZ62 844 aa13.06□□□□□ -0.32
DNMT3A-202ENST00000321117 TPST1O60507 370 aa13.06□□□□□ -0.32
DNMT3A-202ENST00000321117 RTN3O95197 1032 aaPredicted RBP13.06□□□□□ -0.32
DNMT3A-202ENST00000321117 PIGNO95427 931 aa13.06□□□□□ -0.32
DNMT3A-202ENST00000321117 CHEK2O96017 543 aa13.06□□□□□ -0.32
DNMT3A-202ENST00000321117 PEX2P28328 305 aa13.06□□□□□ -0.32
DNMT3A-202ENST00000321117 RAP1GDS1P52306 607 aa13.06□□□□□ -0.32
DNMT3A-202ENST00000321117 GLRA4Q5JXX5 417 aa13.06□□□□□ -0.32
DNMT3A-202ENST00000321117 RBM44Q6ZP01 1051 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms