RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SCARA3Q6AZY7 606 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 WDR41Q9HAD4 459 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 LIMD1Q9UGP4 676 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 SPPL2AQ8TCT8 520 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 TRPM5Q9NZQ8 1165 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 SRP68Q9UHB9 627 aaKnown RBP17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 TAF6P49848 677 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 SPANXN3Q5MJ09 141 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 BHLHE22Q8NFJ8 381 aaPredicted RBP17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 PRKAG3Q9UGI9 489 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 SNAP91O60641 907 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 FAXCQ5TGI0 409 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 TAF8Q7Z7C8 310 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 NUDT5Q9UKK9 219 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 ITGALP20701 1170 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 STARP49675 285 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 MYDGFQ969H8 173 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 CHKBQ9Y259 395 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 C2CD2Q9Y426 696 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 MGAT5BQ3V5L5 792 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 ING3Q9NXR8 418 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 FCHO1O14526 889 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 PGAM1P18669 254 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 LRPAP1P30533 357 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 ABRAXAS1Q6UWZ7 409 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 FAM126BQ8IXS8 530 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 WDR12Q9GZL7 423 aaKnown RBP17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 ANKZF1Q9H8Y5 726 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 MYO3AQ8NEV4 1616 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 FBXO21O94952 628 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 KCTD21Q4G0X4 260 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 GLB1LQ6UWU2 654 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 STK32CQ86UX6 486 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 RIT2Q99578 217 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 DKK3Q9UBP4 350 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 NDUFB5O43674 189 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 ASS1P00966 412 aaKnown RBP17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 AADATQ8N5Z0 425 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 DPY30Q9C005 99 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 ACTR8Q9H981 624 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 PCDHB7Q9Y5E2 793 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 COMMD3-BMI1R4GMX3 469 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 WWP2O00308 870 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 OR6B1O95007 311 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 GSTM5P46439 218 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 CCDC185Q8N715 623 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 REEP1Q9H902 201 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 CAPN6Q9Y6Q1 641 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 A0A1W2PRG6 482 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 ALDH5A1P51649 535 aaPredicted RBP17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 SORCS3Q9UPU3 1222 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 DUSP10Q9Y6W6 482 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 PSMG1O95456 288 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 GH1P01241 217 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 MMP10P09238 476 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 GSSP48637 474 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 BNC1Q01954 994 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 CSHL1Q14406 222 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 FIGNQ5HY92 759 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 EFCAB12Q6NXP0 572 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 YTHDF3Q7Z739 585 aaKnown RBP17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 ZSCAN18Q8TBC5 510 aaPredicted RBP17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 TIMMDC1Q9NPL8 285 aa17.24■□□□□ 0.35
SMCHD1-201ENST00000320876 KCNH1O95259 989 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 CDK16Q00536 496 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 ZNF844Q08AG5 666 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 PHACTR4Q8IZ21 702 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 RNPEPL1Q9HAU8 725 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 CNTNAP5Q8WYK1 1306 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 SLC2A4P14672 509 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 MTA1Q13330 715 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 AKIRIN2Q53H80 203 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 C16orf86Q6ZW13 317 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 KCNMB4Q86W47 210 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 CBWD2Q8IUF1 395 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 GTF3C2Q8WUA4 911 aaPredicted RBP17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 SLC25A23Q9BV35 468 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 CCDC59Q9P031 241 aaKnown RBP17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 PIM2Q9P1W9 311 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 PLA2R1Q13018 1463 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 CCDC162PA2VCL2 907 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 SMIM22K7EJ46 135 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 CDH3P22223 829 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 FGD3Q5JSP0 725 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 PACS2Q86VP3 889 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 FBXO25Q8TCJ0 367 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 ERI2A8K979 691 aaKnown RBP17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 EPN2O95208 641 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 PRKAR1AP10644 381 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 NEK3P51956 506 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 MTTPP55157 894 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 CRELD2Q6UXH1 353 aaPredicted RBP17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 KBTBD8Q8NFY9 601 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 NMRAL1Q9HBL8 299 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 A1CFQ9NQ94 594 aaKnown RBP17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 ETS1P14921 441 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 CYP2A7P20853 494 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 NRF1Q16656 503 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 EPC2Q52LR7 807 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 MYLPFQ96A32 169 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms