RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 NDC80O14777 642 aa16.27■□□□□ 0.19
CALR-201ENST00000316448 RTN3O95197 1032 aaPredicted RBP16.27■□□□□ 0.19
CALR-201ENST00000316448 IFNB1P01574 187 aa16.27■□□□□ 0.19
CALR-201ENST00000316448 ZDHHC11BP0C7U3 371 aa16.27■□□□□ 0.19
CALR-201ENST00000316448 RPL22P35268 128 aaKnown RBP16.27■□□□□ 0.19
CALR-201ENST00000316448 ARL4AP40617 200 aa16.27■□□□□ 0.19
CALR-201ENST00000316448 RAB33AQ14088 237 aa16.27■□□□□ 0.19
CALR-201ENST00000316448 MORF4L2Q15014 288 aa16.27■□□□□ 0.19
CALR-201ENST00000316448 RNASEH2BQ5TBB1 312 aaKnown RBP16.27■□□□□ 0.19
CALR-201ENST00000316448 MSANTD2Q6P1R3 559 aa16.27■□□□□ 0.19
CALR-201ENST00000316448 DARS2Q6PI48 645 aaKnown RBP16.27■□□□□ 0.19
CALR-201ENST00000316448 RFX8Q6ZV50 586 aa16.27■□□□□ 0.19
CALR-201ENST00000316448 HERC6Q8IVU3 1022 aa16.27■□□□□ 0.19
CALR-201ENST00000316448 KLHL23Q8NBE8 558 aa16.27■□□□□ 0.19
CALR-201ENST00000316448 HERVK_113Q902F9 699 aa16.27■□□□□ 0.19
CALR-201ENST00000316448 ZBED2Q9BTP6 218 aa16.27■□□□□ 0.19
CALR-201ENST00000316448 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.27■□□□□ 0.19
CALR-201ENST00000316448 DTLQ9NZJ0 730 aa16.27■□□□□ 0.19
CALR-201ENST00000316448 RCOR3Q9P2K3 495 aaPredicted RBP16.27■□□□□ 0.19
CALR-201ENST00000316448 MAGED2Q9UNF1 606 aaPredicted RBP16.27■□□□□ 0.19
CALR-201ENST00000316448 SHOC2Q9UQ13 582 aa16.27■□□□□ 0.19
CALR-201ENST00000316448 H3BRJ5 948 aa16.26■□□□□ 0.19
CALR-201ENST00000316448 H7C0C1 242 aa16.26■□□□□ 0.19
CALR-201ENST00000316448 EEF2KO00418 725 aaKnown RBP16.26■□□□□ 0.19
CALR-201ENST00000316448 MCF2LO15068 1137 aa16.26■□□□□ 0.19
CALR-201ENST00000316448 DCLK1O15075 740 aa16.26■□□□□ 0.19
CALR-201ENST00000316448 HMGA1P17096 107 aaKnown RBP16.26■□□□□ 0.19
CALR-201ENST00000316448 RBL1P28749 1068 aa16.26■□□□□ 0.19
CALR-201ENST00000316448 ATP5OP48047 213 aa16.26■□□□□ 0.19
CALR-201ENST00000316448 AIF1P55008 147 aa16.26■□□□□ 0.19
CALR-201ENST00000316448 GPS1Q13098 491 aa16.26■□□□□ 0.19
CALR-201ENST00000316448 CLP1Q92989 425 aaKnown RBP16.26■□□□□ 0.19
CALR-201ENST00000316448 RNF34Q969K3 372 aa16.26■□□□□ 0.19
CALR-201ENST00000316448 TLCD1Q96CP7 247 aa16.26■□□□□ 0.19
CALR-201ENST00000316448 PGM2Q96G03 612 aa16.26■□□□□ 0.19
CALR-201ENST00000316448 SLC39A13Q96H72 371 aa16.26■□□□□ 0.19
CALR-201ENST00000316448 TRIM62Q9BVG3 475 aa16.26■□□□□ 0.19
CALR-201ENST00000316448 TTLL2Q9BWV7 592 aa16.26■□□□□ 0.19
CALR-201ENST00000316448 ZBP1Q9H171 429 aa16.26■□□□□ 0.19
CALR-201ENST00000316448 LAMA2P24043 3122 aaKnown RBP16.26■□□□□ 0.19
CALR-201ENST00000316448 KCNU1A8MYU2 1149 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 TEX28O15482 410 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 MFSD11O43934 449 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 ARHGEF15O94989 841 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 TTC4O95801 387 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 URODP06132 367 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 ERCC2P18074 760 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 TUFMP49411 452 aaKnown RBP16.25■□□□□ 0.19
CALR-201ENST00000316448 DNAJC21Q5F1R6 531 aaKnown RBP16.25■□□□□ 0.19
CALR-201ENST00000316448 CEP128Q6ZU80 1094 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 CROCCP2Q86T23 111 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 TAB3Q8N5C8 712 aaPredicted RBP16.25■□□□□ 0.19
CALR-201ENST00000316448 FCRL2Q96LA5 508 aaPredicted RBP16.25■□□□□ 0.19
CALR-201ENST00000316448 CENPHQ9H3R5 247 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 CYP4F11Q9HBI6 524 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 OR12D3Q9UGF7 316 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 TPX2Q9ULW0 747 aaKnown RBP16.25■□□□□ 0.19
CALR-201ENST00000316448 NEU3Q9UQ49 428 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 FARP1Q9Y4F1 1045 aaPredicted RBP16.25■□□□□ 0.19
CALR-201ENST00000316448 INSL6Q9Y581 213 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 PCDHB12Q9Y5F1 795 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 PAGE1O75459 146 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 LRIG2O94898 1065 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 SPATA31D3P0C874 917 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 EFEMP1Q12805 493 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 ARL13BQ3SXY8 428 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 SPATA31D4Q6ZUB0 917 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 SP7Q8TDD2 431 aaPredicted RBP16.25■□□□□ 0.19
CALR-201ENST00000316448 SIK2Q9H0K1 926 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 OSBPL2Q9H1P3 480 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 CCSER2Q9H7U1 834 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 COMMD8Q9NX08 183 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 CLIC5Q9NZA1 410 aa16.25■□□□□ 0.19
CALR-201ENST00000316448 ZFXP17010 805 aaPredicted RBP16.24■□□□□ 0.19
CALR-201ENST00000316448 HCAR3P49019 387 aa16.24■□□□□ 0.19
CALR-201ENST00000316448 PAFAH1B3Q15102 231 aaKnown RBP16.24■□□□□ 0.19
CALR-201ENST00000316448 TPGS2Q68CL5 300 aa16.24■□□□□ 0.19
CALR-201ENST00000316448 PSRC1Q6PGN9 363 aaPredicted RBP16.24■□□□□ 0.19
CALR-201ENST00000316448 C14orf80Q86SX3 495 aa16.24■□□□□ 0.19
CALR-201ENST00000316448 ARHGAP18Q8N392 663 aa16.24■□□□□ 0.19
CALR-201ENST00000316448 RSAD2Q8WXG1 361 aa16.24■□□□□ 0.19
CALR-201ENST00000316448 OLFM3Q96PB7 478 aa16.24■□□□□ 0.19
CALR-201ENST00000316448 RBM15Q96T37 977 aaKnown RBP eCLIP16.24■□□□□ 0.196e-13■■□□□ 13.4
CALR-201ENST00000316448 RAD9AQ99638 391 aa16.24■□□□□ 0.19
CALR-201ENST00000316448 CAPS2Q9BXY5 557 aa16.24■□□□□ 0.19
CALR-201ENST00000316448 PHACTR1Q9C0D0 580 aa16.24■□□□□ 0.19
CALR-201ENST00000316448 RXFP1Q9HBX9 757 aa16.24■□□□□ 0.19
CALR-201ENST00000316448 TLR8Q9NR97 1041 aaKnown RBP16.24■□□□□ 0.19
CALR-201ENST00000316448 MRPL17Q9NRX2 175 aaKnown RBP16.24■□□□□ 0.19
CALR-201ENST00000316448 DNAJC17Q9NVM6 304 aaKnown RBP16.24■□□□□ 0.19
CALR-201ENST00000316448 NINJ2Q9NZG7 142 aa16.24■□□□□ 0.19
CALR-201ENST00000316448 YIPF1Q9Y548 306 aa16.24■□□□□ 0.19
CALR-201ENST00000316448 SLC4A7Q9Y6M7 1214 aa16.24■□□□□ 0.19
CALR-201ENST00000316448 BCLAF3A2AJT9 711 aaKnown RBP16.23■□□□□ 0.19
CALR-201ENST00000316448 A6NNZ2 444 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 ACSL3O95573 720 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 CNPP09543 421 aaKnown RBP16.23■□□□□ 0.19
CALR-201ENST00000316448 CTSAP10619 480 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 PPM1AP35813 382 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 GAD2Q05329 585 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms