RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 FARP1Q9Y4F1 1045 aaPredicted RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 SLC30A1Q9Y6M5 507 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 SF3B1O75533 1304 aaKnown RBP eCLIP8.93□□□□□ -0.983e-9■■■■■ 206.8
USF3-201ENST00000316407 FADS2O95864 444 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 VAV1P15498 845 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 CNTN1Q12860 1018 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 DSG4Q86SJ6 1040 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 LINC00523Q86TU6 105 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 SYNE4Q8N205 404 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 DCPSQ96C86 337 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 CCSER2Q9H7U1 834 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 CYP7B1O75881 506 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 ME2P23368 584 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 EPHA10Q5JZY3 1008 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 ERAP2Q6P179 960 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 S100ZQ8WXG8 99 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 NSMCE2Q96MF7 247 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 CARD8Q9Y2G2 431 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 MYH14Q7Z406 1995 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 TCOF1Q13428 1488 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 A0A0U1RQJ8 604 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 KANSL1LA0AUZ9 987 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 PAPD7Q5XG87 772 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 PLA2G4FQ68DD2 849 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 TDRD1Q9BXT4 1180 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 RNF38Q9H0F5 515 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 TSPAN3O60637 253 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 TOP3BO95985 862 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 PLA2G4EQ3MJ16 856 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 CES3Q6UWW8 571 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 PCDH20Q8N6Y1 951 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 EMC1Q8N766 993 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 POMGNT2Q8NAT1 580 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 SKA1Q96BD8 255 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 COX4I2Q96KJ9 171 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 VPS45Q9NRW7 570 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 SLAIN2Q9P270 581 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 AK5Q9Y6K8 562 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 NR4A1P22736 598 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 ALDH9A1P49189 494 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 ITGA1P56199 1179 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 CSHL1Q14406 222 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 FAM126BQ8IXS8 530 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 ATXN2LQ8WWM7 1075 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 TAMM41Q96BW9 452 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 POP1Q99575 1024 aaKnown RBP8.93□□□□□ -0.98
USF3-201ENST00000316407 MIEF1Q9NQG6 463 aa8.93□□□□□ -0.98
USF3-201ENST00000316407 KPNA6O60684 536 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 PRKAR1AP10644 381 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 EFR3AQ14156 821 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 MTX3Q5HYI7 312 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 CRTC3Q6UUV7 619 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 SETD9Q8NE22 299 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 PHACTR1Q9C0D0 580 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 FAM172BPA6NC97 362 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 TMEM253P0C7T8 217 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 GPC1P35052 558 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 GLRA4Q5JXX5 417 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 SEPT12Q8IYM1 358 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 NCKIPSDQ9NZQ3 722 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 ZNF521Q96K83 1311 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 ENDOD1O94919 500 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 SGPL1O95470 568 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 SLC2A4P14672 509 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 RPL6Q02878 288 aaKnown RBP8.92□□□□□ -0.98
USF3-201ENST00000316407 TTC27Q6P3X3 843 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 NET1Q7Z628 596 aaPredicted RBP8.92□□□□□ -0.98
USF3-201ENST00000316407 EGFL6Q8IUX8 553 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 FEZF2Q8TBJ5 459 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 ERVV-2B6SEH9 535 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 FBXW8Q8N3Y1 598 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 SAMD3Q8N6K7 520 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 TRPC4Q9UBN4 977 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 ENO2P09104 434 aaPredicted RBP8.92□□□□□ -0.98
USF3-201ENST00000316407 THAP1Q9NVV9 213 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 CCNCP24863 283 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 NPY2RP49146 381 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 USP46P62068 366 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 DENND5AQ6IQ26 1287 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 GALNT18Q6P9A2 607 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 RNF44Q7L0R7 432 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 GALNT5Q7Z7M9 940 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 CLEC10AQ8IUN9 316 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 CUEDC1Q9NWM3 386 aaPredicted RBP8.92□□□□□ -0.98
USF3-201ENST00000316407 NDUFB5O43674 189 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 RAP1GAPP47736 663 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 POU6F1Q14863 301 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 EGFLAMQ63HQ2 1017 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 POF1BQ8WVV4 589 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 POMKQ9H5K3 350 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 ZFYVE28Q9HCC9 887 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 CRLS1Q9UJA2 301 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 NRKQ7Z2Y5 1582 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 CPDO75976 1380 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 ECE2O60344 883 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 PTPN5P54829 565 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 SPATA2LQ8IUW3 424 aaPredicted RBP8.92□□□□□ -0.98
USF3-201ENST00000316407 CINPQ9BW66 212 aaPredicted RBP8.92□□□□□ -0.98
USF3-201ENST00000316407 KCNA6P17658 529 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 ITGB6P18564 788 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms