RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 TBCCQ15814 346 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 RAB6CQ53S08 254 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 PRPF39Q86UA1 669 aaKnown RBP15.37■□□□□ 0.05
CHFR-202ENST00000315585 NUDCD3Q8IVD9 361 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 STAMBPL1Q96FJ0 436 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 BTBD10Q9BSF8 475 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 WWP1Q9H0M0 922 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 RAB6CQ9H0N0 254 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 FAM96AQ9H5X1 160 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.37■□□□□ 0.05
CHFR-202ENST00000315585 RNF186Q9NXI6 227 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 L3MBTL1Q9Y468 752 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 PIAS1O75925 651 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 C1QAP02745 245 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 BGNP21810 368 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 LRPAP1P30533 357 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 NOS2P35228 1153 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 TMPRSS15P98073 1019 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 GBE1Q04446 702 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 TRIM32Q13049 653 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 LRRC8BQ6P9F7 803 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 CRLF3Q8IUI8 442 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 TMEM130Q8N3G9 435 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 NSMCE1Q8WV22 266 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 HNRNPABQ99729 332 aaKnown RBP15.37■□□□□ 0.05
CHFR-202ENST00000315585 TMEM120AQ9BXJ8 343 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 MMADHCQ9H3L0 296 aaPredicted RBP15.37■□□□□ 0.05
CHFR-202ENST00000315585 CREBZFQ9NS37 354 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 FAM105AQ9NUU6 356 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 DTLQ9NZJ0 730 aa15.37■□□□□ 0.05
CHFR-202ENST00000315585 DGKIO75912 1065 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 LUC7L3O95232 432 aaKnown RBP15.36■□□□□ 0.05
CHFR-202ENST00000315585 CBX6O95503 412 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 METTL18O95568 372 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 MYCNP04198 464 aaPredicted RBP15.36■□□□□ 0.05
CHFR-202ENST00000315585 PDGFRBP09619 1106 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 RAB27AP51159 221 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 OVGP1Q12889 678 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 PLEKHG4Q58EX7 1191 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 ANKRD20A2Q5SQ80 823 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 FAXCQ5TGI0 409 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 ANKRD20A1Q5TYW2 823 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 RFWD2Q8NHY2 731 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 SKA1Q96BD8 255 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 KCTD15Q96SI1 283 aaPredicted RBP15.36■□□□□ 0.05
CHFR-202ENST00000315585 SLC9A7Q96T83 725 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 RNF39Q9H2S5 420 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 MOCS1Q9NZB8 636 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 FZD10Q9ULW2 581 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 NOD1Q9Y239 953 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 PPEF2O14830 753 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 GYG2O15488 501 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 DAB1O75553 588 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 RFPL1O75677 317 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 ALDH1A2O94788 518 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 WARSP23381 471 aaKnown RBP15.36■□□□□ 0.05
CHFR-202ENST00000315585 GLUD2P49448 558 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 MGAT3Q09327 533 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 CTC1Q2NKJ3 1217 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 SYCP2LQ5T4T6 812 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 STEAP4Q687X5 459 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 NCBP2-AS2Q69YL0 99 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 CCSAPQ6IQ19 270 aaPredicted RBP15.36■□□□□ 0.05
CHFR-202ENST00000315585 NDUFAF2Q8N183 169 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 FAM13CQ8NE31 585 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 RAET1EQ8TD07 263 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 PXYLP1Q8TE99 480 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 KBTBD7Q8WVZ9 684 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 KCTD13Q8WZ19 329 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 N4BP2L2Q92802 583 aaPredicted RBP15.36■□□□□ 0.05
CHFR-202ENST00000315585 PTPRN2Q92932 1015 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 UTP4Q969X6 686 aaKnown RBP15.36■□□□□ 0.05
CHFR-202ENST00000315585 OLFM3Q96PB7 478 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 DUSP16Q9BY84 665 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 CXCL16Q9H2A7 254 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 DCLRE1BQ9H816 532 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 LRRC4Q9HBW1 653 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 MTMR10Q9NXD2 777 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 SIRPGQ9P1W8 387 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 SORCS3Q9UPU3 1222 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 GIT1Q9Y2X7 761 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 TRIP11Q15643 1979 aa15.36■□□□□ 0.05
CHFR-202ENST00000315585 NCAM2O15394 837 aa15.35■□□□□ 0.05
CHFR-202ENST00000315585 FBXO21O94952 628 aa15.35■□□□□ 0.05
CHFR-202ENST00000315585 CHRNA1P02708 482 aa15.35■□□□□ 0.05
CHFR-202ENST00000315585 CTSHP09668 335 aa15.35■□□□□ 0.05
CHFR-202ENST00000315585 ESRRAP11474 423 aaPredicted RBP15.35■□□□□ 0.05
CHFR-202ENST00000315585 CCDC130P13994 396 aa15.35■□□□□ 0.05
CHFR-202ENST00000315585 ELNP15502 786 aa15.35■□□□□ 0.05
CHFR-202ENST00000315585 THPOP40225 353 aa15.35■□□□□ 0.05
CHFR-202ENST00000315585 SULT1E1P49888 294 aa15.35■□□□□ 0.05
CHFR-202ENST00000315585 ZNF135P52742 658 aaPredicted RBP15.35■□□□□ 0.05
CHFR-202ENST00000315585 MARK2Q7KZI7 788 aaKnown RBP15.35■□□□□ 0.05
CHFR-202ENST00000315585 LIMS2Q7Z4I7 341 aa15.35■□□□□ 0.05
CHFR-202ENST00000315585 ADGRF2Q8IZF7 708 aa15.35■□□□□ 0.05
CHFR-202ENST00000315585 SLC2A14Q8TDB8 520 aa15.35■□□□□ 0.05
CHFR-202ENST00000315585 MCUR1Q96AQ8 359 aa15.35■□□□□ 0.05
CHFR-202ENST00000315585 FAM149B1Q96BN6 582 aa15.35■□□□□ 0.05
CHFR-202ENST00000315585 OXNAD1Q96HP4 312 aaPredicted RBP15.35■□□□□ 0.05
CHFR-202ENST00000315585 BRD8Q9H0E9 1235 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms