RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 NAA30Q147X3 362 aaPredicted RBP13.83□□□□□ -0.19
RFFL-201ENST00000315249 TUBGCP3Q96CW5 907 aa13.83□□□□□ -0.19
RFFL-201ENST00000315249 FOXP3Q9BZS1 431 aa13.83□□□□□ -0.19
RFFL-201ENST00000315249 GPAMQ9HCL2 828 aa13.83□□□□□ -0.19
RFFL-201ENST00000315249 PADI4Q9UM07 663 aa13.83□□□□□ -0.19
RFFL-201ENST00000315249 EEF1DP29692 281 aaKnown RBP13.83□□□□□ -0.19
RFFL-201ENST00000315249 SLC29A2Q14542 456 aa13.83□□□□□ -0.19
RFFL-201ENST00000315249 TRIML2Q8N7C3 387 aa13.83□□□□□ -0.19
RFFL-201ENST00000315249 ZNF557Q8N988 423 aaPredicted RBP13.83□□□□□ -0.19
RFFL-201ENST00000315249 PCYOX1LQ8NBM8 494 aa13.83□□□□□ -0.19
RFFL-201ENST00000315249 PIK3R5Q8WYR1 880 aa13.83□□□□□ -0.19
RFFL-201ENST00000315249 OR12D3Q9UGF7 316 aa13.83□□□□□ -0.19
RFFL-201ENST00000315249 MRC1P22897 1456 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 CSHL1Q14406 222 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 TOMM20Q15388 145 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 C15orf59Q2T9L4 293 aaPredicted RBP13.83□□□□□ -0.2
RFFL-201ENST00000315249 ACTL9Q8TC94 416 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 C18orf25Q96B23 403 aaPredicted RBP13.83□□□□□ -0.2
RFFL-201ENST00000315249 ZFYVE19Q96K21 471 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 FAM167BQ9BTA0 163 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 PIK3C2AO00443 1686 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 OR56A5P0C7T3 313 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 SMPD1P17405 629 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 BLVRAP53004 296 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 GUCY1A3Q02108 690 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 CLEC17AQ6ZS10 378 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.83□□□□□ -0.2
RFFL-201ENST00000315249 BLOC1S4Q9NUP1 217 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 CCL5P13501 91 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 FUT11Q495W5 492 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 LRRC6Q86X45 466 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 FRMD8Q9BZ67 464 aaPredicted RBP13.83□□□□□ -0.2
RFFL-201ENST00000315249 EIF3LQ9Y262 564 aaKnown RBP13.83□□□□□ -0.2
RFFL-201ENST00000315249 CYP7B1O75881 506 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 ADH1CP00326 375 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 TMEM161BQ8NDZ6 487 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 DACH2Q96NX9 599 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 YY1AP1Q9H869 796 aa13.83□□□□□ -0.2
RFFL-201ENST00000315249 FAF1Q9UNN5 650 aaPredicted RBP13.83□□□□□ -0.2
RFFL-201ENST00000315249 CNTNAP1P78357 1384 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 TLR5O60602 858 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 KATNA1O75449 491 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 RASSF9O75901 435 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 HSPA1AP0DMV8 641 aaKnown RBP13.82□□□□□ -0.2
RFFL-201ENST00000315249 HSPA1BP0DMV9 641 aaKnown RBP13.82□□□□□ -0.2
RFFL-201ENST00000315249 CHN1P15882 459 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 NME5P56597 212 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 ALDH6A1Q02252 535 aaKnown RBP13.82□□□□□ -0.2
RFFL-201ENST00000315249 HIC1Q14526 733 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 RAET1GQ6H3X3 334 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 SH2D3CQ8N5H7 860 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 GLIS3Q8NEA6 775 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 LENG9Q96B70 501 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 ZBTB10Q96DT7 871 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 ZNF333Q96JL9 665 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 NLNQ9BYT8 704 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 PCDHB9Q9Y5E1 797 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 SNX5Q9Y5X3 404 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 KIF13AQ9H1H9 1805 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 CYP3A7-CYP3A51PA0A087WV96 503 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 CCNT2O60583 730 aaKnown RBP13.82□□□□□ -0.2
RFFL-201ENST00000315249 CYP2A7P20853 494 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 CYP3A7P24462 503 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.82□□□□□ -0.27e-8■■■■■ 32.9
RFFL-201ENST00000315249 TIMM44O43615 452 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 MIPP30301 263 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 WASP42768 502 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 SERPINB8P50452 374 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 PRMT2P55345 433 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 GCNT1Q02742 428 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 HSP90AA5PQ58FG0 334 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 CACHD1Q5VU97 1274 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 LZTR1Q8N653 840 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 ACTR8Q9H981 624 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 ACTR5Q9H9F9 607 aaPredicted RBP13.82□□□□□ -0.2
RFFL-201ENST00000315249 THEGQ9P2T0 379 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 SNX8Q9Y5X2 465 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 A0A087X0B3 334 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 CHUKO15111 745 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 AGTP01019 485 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 CES3Q6UWW8 571 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 ANO5Q75V66 913 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 PLEKHA8Q96JA3 519 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 AGXT2Q9BYV1 514 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 DNAJC8O75937 253 aaPredicted RBP13.82□□□□□ -0.2
RFFL-201ENST00000315249 TRUB2O95900 331 aaKnown RBP13.82□□□□□ -0.2
RFFL-201ENST00000315249 SLC16A1P53985 500 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 BTNL9Q6UXG8 535 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 POLR1EQ9GZS1 481 aaKnown RBP13.82□□□□□ -0.2
RFFL-201ENST00000315249 ZFYVE1Q9HBF4 777 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 MIEF1Q9NQG6 463 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 PLK2Q9NYY3 685 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 H2AFY2Q9P0M6 372 aaPredicted RBP13.82□□□□□ -0.2
RFFL-201ENST00000315249 GOLGA8TH3BQL2 631 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 GPR25O00155 361 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 FNTAP49354 379 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 APLP1P51693 650 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 MPP3Q13368 585 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 MIER2Q8N344 545 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 ACOX2Q99424 681 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms