RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 DYRK4Q9NR20 520 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 NAALADL1Q9UQQ1 740 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 KLF11O14901 512 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 ZNF185O15231 689 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 ZNF862O60290 1169 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 LDLRP01130 860 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 TNK2Q07912 1038 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 CNTN1Q12860 1018 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 PEX6Q13608 980 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 TWF2Q6IBS0 349 aaKnown RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 KIAA0895Q8NCT3 520 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 KIF12Q96FN5 646 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 PRDM4Q9UKN5 801 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 MAGED2Q9UNF1 606 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 ST14Q9Y5Y6 855 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 AP1M2Q9Y6Q5 423 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 UMODL1Q5DID0 1318 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 ALDH1A1P00352 501 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 ATP6V0D1P61421 351 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 PRKCEQ02156 737 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 ATP6AP1LQ52LC2 224 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 ZDHHC13Q8IUH4 622 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 MCUQ8NE86 351 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 MTMR9Q96QG7 549 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 TMEM117Q9H0C3 514 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 C20orf96Q9NUD7 363 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 LDOC1O95751 146 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 SAT1P21673 171 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 PIK3R1P27986 724 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 RPL10AP62906 217 aaKnown RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 HPCAP84074 193 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 POU4F1Q01851 419 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 INTS6LQ5JSJ4 861 aaKnown RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 GPAT2Q6NUI2 795 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 DHDDSQ86SQ9 333 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 SFRP1Q8N474 314 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 SH2D3CQ8N5H7 860 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 ZNF75CPQ92670 426 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 ZMYM5Q9UJ78 669 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 CAB39Q9Y376 341 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 PIGBOS1A0A0B4J2F0 54 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 WDR91A4D1P6 747 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 MSH4O15457 936 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 GTF2BQ00403 316 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 TBL3Q12788 808 aaKnown RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 ZBTB49Q6ZSB9 765 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 DDIASQ8IXT1 998 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 SLC35C1Q96A29 364 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 L3MBTL3Q96JM7 780 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 PANX3Q96QZ0 392 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 TSC22D4Q9Y3Q8 395 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 ASNA1O43681 348 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 TRAP1Q12931 704 aaKnown RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 BROXQ5VW32 411 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 NIPA2Q8N8Q9 360 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 SNX31Q8N9S9 440 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 BCL7BQ9BQE9 202 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 TRMT6Q9UJA5 497 aaKnown RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 C5orf60A6NFR6 353 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 ALDH1A3P47895 512 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 NUDT2P50583 147 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 GTF2H3Q13889 308 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 INO80DQ53TQ3 878 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 MFSD14CQ5VZR4 134 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 ANKS1BQ7Z6G8 1248 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 TCAIMQ8N3R3 496 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 C7orf31Q8N865 590 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 MYDGFQ969H8 173 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 DYNLL2Q96FJ2 89 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 FAM84AQ96KN4 292 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 PARK7Q99497 189 aaKnown RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 HHATLQ9HCP6 504 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 TMCC3Q9ULS5 477 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 UBDO15205 165 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 TRIM49P0CI25 452 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 TRIM49CP0CI26 452 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 CDC25AP30304 524 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 CDC73Q6P1J9 531 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 TRMT1LQ7Z2T5 733 aaKnown RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 RDH12Q96NR8 316 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 LACRTQ9GZZ8 138 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 ASCC2Q9H1I8 757 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 NCK2O43639 380 aa9.02□□□□□ -0.96
COL6A5-202ENST00000312481 CASP2P42575 452 aa9.02□□□□□ -0.96
COL6A5-202ENST00000312481 CACNA2D1P54289 1103 aa9.02□□□□□ -0.96
COL6A5-202ENST00000312481 FAM187BQ17R55 369 aa9.02□□□□□ -0.96
COL6A5-202ENST00000312481 CAPN12Q6ZSI9 719 aa9.02□□□□□ -0.96
COL6A5-202ENST00000312481 SHC3Q92529 594 aa9.02□□□□□ -0.96
COL6A5-202ENST00000312481 PLEKHA8Q96JA3 519 aa9.02□□□□□ -0.96
COL6A5-202ENST00000312481 VTA1Q9NP79 307 aa9.02□□□□□ -0.96
COL6A5-202ENST00000312481 NPHP3-ACAD11A0A0J9YXS1 232 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 FOXN3O00409 490 aaPredicted RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 NTRK1P04629 796 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 NPR3P17342 541 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 BCAP31P51572 246 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 CASP7P55210 303 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 TATDN1Q6P1N9 297 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 BRSK2Q8IWQ3 736 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 ALLCQ8N6M5 410 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 PIK3C3Q8NEB9 887 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms