RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 RPA1P27694 616 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 TALDO1P37837 337 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 CLCN3P51790 818 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 GIT2Q14161 759 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 PCSK7Q16549 785 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 FBXO36Q8NEA4 188 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 CSGALNACT1Q8TDX6 532 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 SYN2Q92777 582 aaPredicted RBP8.39□□□□□ -1.07
VPS41-202ENST00000310301 ZNF184Q99676 751 aaPredicted RBP8.39□□□□□ -1.07
VPS41-202ENST00000310301 MYOM1P52179 1685 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 TRIM43BA6NCK2 446 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 C2CD2LO14523 706 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 TNFRSF21O75509 655 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 B3GAT3O94766 335 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 RGS7P49802 495 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 SLC20A2Q08357 652 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 NFYCQ13952 458 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 CNGA2Q16280 664 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 KHDRBS2Q5VWX1 349 aaKnown RBP8.39□□□□□ -1.07
VPS41-202ENST00000310301 ZNF57Q68EA5 555 aaPredicted RBP8.39□□□□□ -1.07
VPS41-202ENST00000310301 LRRN4CLQ8ND94 238 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 ZNF669Q96BR6 464 aaPredicted RBP8.39□□□□□ -1.07
VPS41-202ENST00000310301 OSMRQ99650 979 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 SEPT5Q99719 369 aaPredicted RBP8.39□□□□□ -1.07
VPS41-202ENST00000310301 GORASP1Q9BQQ3 440 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 PHF20Q9BVI0 1012 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 UNC93B1Q9H1C4 597 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 MYLK2Q9H1R3 596 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 WHRNQ9P202 907 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 NFASCO94856 1347 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 PPP1R3GB7ZBB8 358 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 NR5A2O00482 541 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 SASH3O75995 380 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 PDE9AO76083 593 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 FCGR1AP12314 374 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 CDK17Q00537 523 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 IRF5Q13568 498 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 RGS21Q2M5E4 152 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 KLHL12Q53G59 568 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 TMEM63BQ5T3F8 832 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 SEL1L3Q68CR1 1132 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 MAGED4Q96JG8 741 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 SAMD11Q96NU1 681 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 SERHL2Q9H4I8 314 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 RSAD1Q9HA92 442 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 SERHLQ9NQF3 203 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 NFKBIL1Q9UBC1 381 aaPredicted RBP8.39□□□□□ -1.07
VPS41-202ENST00000310301 PEAK1Q9H792 1746 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 LSM1O15116 133 aaKnown RBP8.39□□□□□ -1.07
VPS41-202ENST00000310301 MYBP10242 640 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 PRLRP16471 622 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 UBA1P22314 1058 aaKnown RBP8.39□□□□□ -1.07
VPS41-202ENST00000310301 ROR2Q01974 943 aaKnown RBP8.39□□□□□ -1.07
VPS41-202ENST00000310301 TRAF3Q13114 568 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 STOX1Q6ZVD7 989 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 DCUN1D1Q96GG9 259 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 ADAM2Q99965 735 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 ZSWIM1Q9BR11 485 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 THAP2Q9H0W7 228 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 HMG20AQ9NP66 347 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 WDR35Q9P2L0 1181 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 RUVBL2Q9Y230 463 aaKnown RBP8.39□□□□□ -1.07
VPS41-202ENST00000310301 CAPN6Q9Y6Q1 641 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 COL1A2P08123 1366 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 IRS2Q9Y4H2 1338 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 MAP3K13O43283 966 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 RBP3P10745 1247 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 NCKAP1LP55160 1127 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 ALDH6A1Q02252 535 aaKnown RBP8.39□□□□□ -1.07
VPS41-202ENST00000310301 ACCSLQ4AC99 568 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 DGKKQ5KSL6 1271 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 KLHDC7AQ5VTJ3 777 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 GJB7Q6PEY0 223 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 ATPAF2Q8N5M1 289 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 ATG4AQ8WYN0 398 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 OLFM1Q99784 485 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 C1orf50Q9BV19 199 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 CHST12Q9NRB3 414 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 EURLQ9NYK6 297 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 RBPJLQ9UBG7 517 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 CHKBQ9Y259 395 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 MYMKA6NI61 221 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 WTIPA6NIX2 430 aaPredicted RBP8.38□□□□□ -1.07
VPS41-202ENST00000310301 EEF2KO00418 725 aaKnown RBP8.38□□□□□ -1.07
VPS41-202ENST00000310301 GLI1P08151 1106 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 CCDC130P13994 396 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 POU1F1P28069 291 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 CENPAP49450 140 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 POU4F1Q01851 419 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 CTXN3Q4LDR2 81 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 OR6Y1Q8NGX8 325 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 RIPOR3Q96MK2 946 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 UROC1Q96N76 676 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 LATS2Q9NRM7 1088 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 DMGDHQ9UI17 866 aaKnown RBP8.38□□□□□ -1.07
VPS41-202ENST00000310301 R3HDM2Q9Y2K5 976 aaKnown RBP8.38□□□□□ -1.07
VPS41-202ENST00000310301 DUOX1Q9NRD9 1551 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 CENPXA8MT69 81 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 MSH4O15457 936 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 CLOCKO15516 846 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms