RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 C1orf228Q6PIY5 440 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 SPATA31D4Q6ZUB0 917 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 B4GALNT4Q76KP1 1039 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 TCEAL8Q8IYN2 117 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 ARHGAP18Q8N392 663 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 AENQ8WTP8 325 aaKnown RBP7.21□□□□□ -1.26
PTCD2-201ENST00000308077 RNF139Q8WU17 664 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 IFT81Q8WYA0 676 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 NKD2Q969F2 451 aaPredicted RBP7.21□□□□□ -1.26
PTCD2-201ENST00000308077 CCDC114Q96M63 670 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 CEP295NLQ96MC4 621 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 MAK16Q9BXY0 300 aaKnown RBP7.21□□□□□ -1.26
PTCD2-201ENST00000308077 MTIF3Q9H2K0 278 aaKnown RBP7.21□□□□□ -1.26
PTCD2-201ENST00000308077 WDCPQ9H6R7 721 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 CCSER2Q9H7U1 834 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 ARHGEF4Q9NR80 690 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 TLR8Q9NR97 1041 aaKnown RBP7.21□□□□□ -1.26
PTCD2-201ENST00000308077 ARHGEF38Q9NXL2 777 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 CLIC5Q9NZA1 410 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 GRHL1Q9NZI5 618 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 STK39Q9UEW8 545 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 RASAL2Q9UJF2 1139 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 NFU1Q9UMS0 254 aa7.21□□□□□ -1.26
PTCD2-201ENST00000308077 UTP11Q9Y3A2 253 aaKnown RBP7.21□□□□□ -1.26
PTCD2-201ENST00000308077 HIDE1A8MVS5 230 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 TGM5O43548 720 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 CREB3O43889 395 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 MAP3K6O95382 1288 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 CXCL14O95715 111 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 FAM153BP0C7A2 387 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 TGM2P21980 687 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 IVDP26440 423 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 KLRC2P26717 231 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 GBP1P32455 592 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 RPL21P46778 160 aaKnown RBP7.2□□□□□ -1.26
PTCD2-201ENST00000308077 GDF10P55107 478 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 SMAD3P84022 425 aaKnown RBP7.2□□□□□ -1.26
PTCD2-201ENST00000308077 CREMQ03060 361 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 TWF1Q12792 350 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 EFEMP1Q12805 493 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 SLC10A2Q12908 348 aaPredicted RBP7.2□□□□□ -1.26
PTCD2-201ENST00000308077 PTK6Q13882 451 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 DPYSQ14117 519 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 TFDP2Q14188 446 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 SHHQ15465 462 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 FAM153CQ494X1 144 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 NCBP2-AS2Q69YL0 99 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 SND1Q7KZF4 910 aaKnown RBP eCLIP7.2□□□□□ -1.26
PTCD2-201ENST00000308077 TMC7Q7Z402 723 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 ALLCQ8N6M5 410 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 TTC13Q8NBP0 860 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 PRSS33Q8NF86 280 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 SPPL3Q8TCT6 385 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.2□□□□□ -1.26
PTCD2-201ENST00000308077 GRK7Q8WTQ7 553 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 POF1BQ8WVV4 589 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 RNF34Q969K3 372 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 SLC39A13Q96H72 371 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 FCRL2Q96LA5 508 aaPredicted RBP7.2□□□□□ -1.26
PTCD2-201ENST00000308077 GDAP1L1Q96MZ0 367 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 SERPINB11Q96P15 392 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 KLHL5Q96PQ7 755 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 TCF25Q9BQ70 676 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 TMEM121Q9BTD3 319 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 RAB17Q9H0T7 212 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 RCOR3Q9P2K3 495 aaPredicted RBP7.2□□□□□ -1.26
PTCD2-201ENST00000308077 FAM153AQ9UHL3 310 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 XPO7Q9UIA9 1087 aaKnown RBP7.2□□□□□ -1.26
PTCD2-201ENST00000308077 NEU3Q9UQ49 428 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 LZTS1Q9Y250 596 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 DRG1Q9Y295 367 aaKnown RBP7.2□□□□□ -1.26
PTCD2-201ENST00000308077 SNX24Q9Y343 169 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 INSL5Q9Y5Q6 135 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 MTCL1Q9Y4B5 1905 aaKnown RBP7.2□□□□□ -1.26
PTCD2-201ENST00000308077 KCNU1A8MYU2 1149 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 C5orf67F2Z3F1 127 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 EEF2KO00418 725 aaKnown RBP7.2□□□□□ -1.26
PTCD2-201ENST00000308077 PRRG1O14668 218 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 DCLK1O15075 740 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 TP73O15350 636 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 ERLIN1O75477 346 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 ITGAVP06756 1048 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 CA3P07451 260 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 CSH1P0DML2 217 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 CSH2P0DML3 217 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 ETS1P14921 441 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 ARL4AP40617 200 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 ALDH1A3P47895 512 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 PSEN1P49768 467 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 EIF3EP60228 445 aaKnown RBP7.2□□□□□ -1.26
PTCD2-201ENST00000308077 GBE1Q04446 702 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 PLD1Q13393 1074 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 CUL1Q13616 776 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 CAMK1Q14012 370 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 PPP1R7Q15435 360 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 ARL13BQ3SXY8 428 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 BRMS1LQ5PSV4 323 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 C10orf120Q5SQS8 335 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 FAM182AQ5T1J6 154 aa7.2□□□□□ -1.26
PTCD2-201ENST00000308077 PLPP4Q5VZY2 271 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms