RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 PCDHA5Q9Y5H7 936 aa12.39□□□□□ -0.43
SMIM4-201ENST00000307106 HEMK1Q9Y5R4 338 aaPredicted RBP12.39□□□□□ -0.43
SMIM4-201ENST00000307106 UBR5O95071 2799 aaPredicted RBP12.39□□□□□ -0.43
SMIM4-201ENST00000307106 FRMD3A2A2Y4 597 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 HHLA1C9JL84 531 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 WNT9AO14904 365 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 RALAP11233 206 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 HLA-FP30511 346 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 RXRGP48443 463 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 PSEN1P49768 467 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 NFATC3Q12968 1075 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 PSMD6Q15008 389 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 PROX2Q3B8N5 592 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 ZNF667Q5HYK9 610 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 CLEC20AQ6ZU45 233 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 USP30Q70CQ3 517 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 CHST9Q7L1S5 443 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 ZNF276Q8N554 614 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 WFIKKN2Q8TEU8 576 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 ZNF516Q92618 1163 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 SDCBP2Q9H190 292 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 PABPC3Q9H361 631 aaKnown RBP12.38□□□□□ -0.43
SMIM4-201ENST00000307106 ERVMER34-1Q9H9K5 563 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 FAM49BQ9NUQ9 324 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 PANK4Q9NVE7 773 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 FBXL12Q9NXK8 326 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 CCDC39Q9UFE4 941 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 KIF3AQ9Y496 699 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 BOD1L1Q8NFC6 3051 aa12.38□□□□□ -0.43
SMIM4-201ENST00000307106 LRRC72A6NJI9 287 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 H3BQV1 296 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 K7ENP7 123 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 TLR4O00206 839 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 PHACTR2O75167 634 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 USP12O75317 370 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 BMP15O95972 392 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 FAM200BP0CF97 657 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 HOXD9P28356 352 aaPredicted RBP12.37□□□□□ -0.43
SMIM4-201ENST00000307106 ADORA2BP29275 332 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 LSSP48449 732 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 NXPH1P58417 271 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 DAB2P98082 770 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 CYP24A1Q07973 514 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 PDE4CQ08493 712 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 EFEMP1Q12805 493 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 KCNJ12Q14500 433 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 ZNF699Q32M78 642 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 SLC45A4Q5BKX6 768 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 RRAGBQ5VZM2 374 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 INO80CQ6PI98 192 aaPredicted RBP12.37□□□□□ -0.43
SMIM4-201ENST00000307106 STXBP4Q6ZWJ1 553 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 SCD5Q86SK9 330 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 C12orf29Q8N999 325 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 VCPIP1Q96JH7 1222 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 CDK5RAP1Q96SZ6 601 aaKnown RBP12.37□□□□□ -0.43
SMIM4-201ENST00000307106 GZF1Q9H116 711 aaPredicted RBP12.37□□□□□ -0.43
SMIM4-201ENST00000307106 RSPH9Q9H1X1 276 aaPredicted RBP12.37□□□□□ -0.43
SMIM4-201ENST00000307106 VRTNQ9H8Y1 702 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 ASCL3Q9NQ33 180 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 SERGEFQ9UGK8 458 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 SUN2Q9UH99 717 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 SCML1Q9UN30 329 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 BSNQ9UPA5 3926 aa12.37□□□□□ -0.43
SMIM4-201ENST00000307106 RP1P56715 2156 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 A0A1W2PP55 124 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 BMT2Q1RMZ1 405 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 MPPE1Q53F39 396 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 C6orf132Q5T0Z8 1188 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 CCDC186Q7Z3E2 898 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 ADIPOR2Q86V24 386 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 FAM217AQ8IXS0 508 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 AHI1Q8N157 1196 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 CRYBG2Q8N1P7 616 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 OR2T34Q8NGX1 318 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 ELMO3Q96BJ8 720 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 SERAC1Q96JX3 654 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 DEPDC7Q96QD5 511 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 NEUROG2Q9H2A3 272 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 MTG2Q9H4K7 406 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 POLR1BQ9H9Y6 1135 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 PNPLA8Q9NP80 782 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 THSD1Q9NS62 852 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 ABCB8Q9NUT2 735 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 CLIC5Q9NZA1 410 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 HMGXB4Q9UGU5 601 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 SSUH2Q9Y2M2 353 aa12.36□□□□□ -0.43
SMIM4-201ENST00000307106 TRIM38O00635 465 aa12.35□□□□□ -0.43
SMIM4-201ENST00000307106 TERTO14746 1132 aaKnown RBP12.35□□□□□ -0.43
SMIM4-201ENST00000307106 MID1O15344 667 aa12.35□□□□□ -0.43
SMIM4-201ENST00000307106 SIGLEC6O43699 453 aa12.35□□□□□ -0.43
SMIM4-201ENST00000307106 SDC3O75056 442 aa12.35□□□□□ -0.43
SMIM4-201ENST00000307106 CSO75390 466 aaKnown RBP12.35□□□□□ -0.43
SMIM4-201ENST00000307106 ATP5BP06576 529 aaKnown RBP12.35□□□□□ -0.43
SMIM4-201ENST00000307106 DLDP09622 509 aaKnown RBP12.35□□□□□ -0.43
SMIM4-201ENST00000307106 HOXD13P35453 343 aa12.35□□□□□ -0.43
SMIM4-201ENST00000307106 CYP2J2P51589 502 aa12.35□□□□□ -0.43
SMIM4-201ENST00000307106 KIF11P52732 1056 aa12.35□□□□□ -0.43
SMIM4-201ENST00000307106 NDST1P52848 882 aa12.35□□□□□ -0.43
SMIM4-201ENST00000307106 SFSWAPQ12872 951 aaKnown RBP12.35□□□□□ -0.43
SMIM4-201ENST00000307106 BIRC3Q13489 604 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms