RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 SKIP12755 728 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 TPSB2P20231 275 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 PTPN9P43378 593 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 TPSAB1Q15661 275 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 NAIF1Q69YI7 327 aaPredicted RBP15.58■□□□□ 0.08
CSDC2-201ENST00000306149 SLC26A9Q7LBE3 791 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 DEFB106AQ8N104 65 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 TTC39CQ8N584 583 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 KBTBD7Q8WVZ9 684 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 SCG3Q8WXD2 468 aaKnown RBP15.58■□□□□ 0.08
CSDC2-201ENST00000306149 CENPIQ92674 756 aaPredicted RBP15.58■□□□□ 0.08
CSDC2-201ENST00000306149 MAGED2Q9UNF1 606 aaPredicted RBP15.58■□□□□ 0.08
CSDC2-201ENST00000306149 MEI4A8MW99 385 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 CREB3O43889 395 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 GSRP00390 522 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 ATP5BP06576 529 aaKnown RBP15.58■□□□□ 0.08
CSDC2-201ENST00000306149 GNL1P36915 607 aaPredicted RBP15.58■□□□□ 0.08
CSDC2-201ENST00000306149 TUBP50607 506 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 SEMA5AQ13591 1074 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 KYAT1Q16773 422 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 N4BP2L1Q5TBK1 243 aaPredicted RBP15.58■□□□□ 0.08
CSDC2-201ENST00000306149 C9orf57Q5W0N0 161 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 ATG14Q6ZNE5 492 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 TMPRSS6Q8IU80 811 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 MTBPQ96DY7 904 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 ATXN7L3BQ96GX2 97 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 SNX27Q96L92 541 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 THTPAQ9BU02 230 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 YIPF3Q9GZM5 350 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 ADARB2Q9NS39 739 aaKnown RBP15.58■□□□□ 0.08
CSDC2-201ENST00000306149 EMCNQ9ULC0 261 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 KCNH4Q9UQ05 1017 aa15.58■□□□□ 0.08
CSDC2-201ENST00000306149 F8W8V4 182 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 SNNO75324 88 aaPredicted RBP15.57■□□□□ 0.08
CSDC2-201ENST00000306149 RECQL4O94761 1208 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 SETSIPP0DME0 302 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 TKTP29401 623 aaKnown RBP15.57■□□□□ 0.08
CSDC2-201ENST00000306149 BST2Q10589 180 aaKnown RBP15.57■□□□□ 0.08
CSDC2-201ENST00000306149 DCAF6Q58WW2 860 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 TMEM154Q6P9G4 183 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 SLC25A41Q8N5S1 370 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 ANKRD52Q8NB46 1076 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 ZNF483Q8TF39 744 aaPredicted RBP15.57■□□□□ 0.08
CSDC2-201ENST00000306149 ZNF778Q96MU6 729 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 SYT15Q9BQS2 421 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 WWP1Q9H0M0 922 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 RNF39Q9H2S5 420 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 XAB2Q9HCS7 855 aaKnown RBP15.57■□□□□ 0.08
CSDC2-201ENST00000306149 ZNF358Q9NW07 568 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 RNF103O00237 685 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 CLDN5O00501 218 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 KIF3CO14782 793 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 USP12O75317 370 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 ERVK-10P10266 1014 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 IGFBP6P24592 240 aaPredicted RBP15.57■□□□□ 0.08
CSDC2-201ENST00000306149 PSMB4P28070 264 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 GJA5P36382 358 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 ARL4AP40617 200 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 MLH1P40692 756 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 PEX19P40855 299 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 NDUFV1P49821 464 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 MXRA7P84157 204 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 PDE1CQ14123 709 aaPredicted RBP15.57■□□□□ 0.08
CSDC2-201ENST00000306149 ZBTB6Q15916 424 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 NME8Q8N427 588 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 BEST2Q8NFU1 509 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 UCMAQ8WVF2 138 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 CDCA5Q96FF9 252 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 P2RY11Q96G91 374 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 AGAP3Q96P47 875 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 SHCBP1LQ9BZQ2 653 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 XPNPEP3Q9NQH7 507 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.57■□□□□ 0.08
CSDC2-201ENST00000306149 DNAJC16Q9Y2G8 782 aa15.57■□□□□ 0.08
CSDC2-201ENST00000306149 A0A0A0MRY4 1105 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 ABCG1P45844 678 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 NR2C2P49116 596 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 SULT1E1P49888 294 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 TBCCQ15814 346 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 NT5DC4Q86YG4 428 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 ARNTL2Q8WYA1 636 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 SPATA13Q96N96 652 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 VCXQ9H320 206 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.56■□□□□ 0.08
CSDC2-201ENST00000306149 USP3Q9Y6I4 520 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 SDR42E2A6NKP2 422 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 KCNK1O00180 336 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 DGKIO75912 1065 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 BEST1O76090 585 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 ZFXP17010 805 aaPredicted RBP15.56■□□□□ 0.08
CSDC2-201ENST00000306149 SP100P23497 879 aaPredicted RBP15.56■□□□□ 0.08
CSDC2-201ENST00000306149 ACAT1P24752 427 aaKnown RBP15.56■□□□□ 0.08
CSDC2-201ENST00000306149 BCAT1P54687 386 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 PDE1BQ01064 536 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 ADIGQ0VDE8 80 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 NME3Q13232 169 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 PPIL2Q13356 520 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 FBXO47Q5MNV8 452 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 SLC27A1Q6PCB7 646 aa15.56■□□□□ 0.08
CSDC2-201ENST00000306149 PACS1Q6VY07 963 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms