RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ZC3H14Q6PJT7 736 aaKnown RBP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 FAM71BQ8TC56 605 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 FOXP3Q9BZS1 431 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 ZCCHC2Q9C0B9 1178 aaKnown RBP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 R3HDMLQ9H3Y0 253 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 ELAC1Q9H777 363 aaKnown RBP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 AGO3Q9H9G7 860 aaKnown RBP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 GTSE1Q9NYZ3 720 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 NAALADL1Q9UQQ1 740 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 YIPF1Q9Y548 306 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 CPQQ9Y646 472 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 DUSP10Q9Y6W6 482 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 DNTTP04053 509 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 FOSL2P15408 326 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 ADSSP30520 456 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 RABGGTBP53611 331 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 SULT2A1Q06520 285 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 CHRDL2Q6WN34 429 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 NT5DC3Q86UY8 548 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 IGSF21Q96ID5 467 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 BTN2A3PQ96KV6 586 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 TOX2Q96NM4 488 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 SPATA16Q9BXB7 569 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 SLC13A1Q9BZW2 595 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 CLPBQ9H078 707 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 AASDHPPTQ9NRN7 309 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 CACNG4Q9UBN1 327 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 PLAAQ9Y263 795 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 TAF1P21675 1872 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 HMGB1P1B2RPK0 211 aaPredicted RBP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 KCNK1O00180 336 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 PRPF4O43172 522 aaKnown RBP eCLIP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 SPAG6O75602 509 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 KCNE1P15382 129 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 CST5P28325 142 aaPredicted RBP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 SPRP35270 261 aaPredicted RBP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 CASP2P42575 452 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 GJA8P48165 433 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 KDSRQ06136 332 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 MAMLD1Q13495 774 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 UGT3A1Q6NUS8 523 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 B4GALNT4Q76KP1 1039 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 EPM2AIP1Q7L775 607 aaPredicted RBP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 SZRD1Q7Z422 152 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 SPATA20Q8TB22 786 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 CXorf40AQ8TE69 158 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 TM6SF2Q9BZW4 377 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 GANQ9H2C0 597 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 LHX5Q9H2C1 402 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 NRDE2Q9H7Z3 1164 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 ERVK-5Q9HDB9 667 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 OGFRQ9NZT2 677 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 TRHDEQ9UKU6 1024 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 RPS6KL1Q9Y6S9 549 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 ADGRA3Q8IWK6 1321 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 A0A1W2PRU2 124 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 FRMD3A2A2Y4 597 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 MDM4O15151 490 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 SOAT2O75908 522 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 PBLDP30039 288 aaPredicted RBP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 OCRLQ01968 901 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 KCNMA1Q12791 1236 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 ZKSCAN8Q15776 578 aaPredicted RBP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 USP45Q70EL2 814 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 DNAJB7Q7Z6W7 309 aaPredicted RBP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 PHF13Q86YI8 300 aaPredicted RBP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 COLGALT1Q8NBJ5 622 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 IRGQQ8WZA9 623 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 STMN2Q93045 179 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 FCRL2Q96LA5 508 aaPredicted RBP9.51□□□□□ -0.89
PTPRE-202ENST00000306042 ZBTB18Q99592 522 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 DPEP3Q9H4B8 488 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 PRDM16Q9HAZ2 1276 aa9.51□□□□□ -0.89
PTPRE-202ENST00000306042 CLUHO75153 1309 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 BRWD3Q6RI45 1802 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 PDZK1P1A8MUH7 402 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 MSI1O43347 362 aaKnown RBP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 MYO1DO94832 1006 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 ATP4AP20648 1035 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 LMO2P25791 158 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 FMO1Q01740 532 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 PLCL1Q15111 1095 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 TTC7BQ86TV6 843 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 FLCNQ8NFG4 579 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 DIS3LQ8TF46 1054 aaKnown RBP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 C9orf72Q96LT7 481 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 TMEM121Q9BTD3 319 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 B3GNT5Q9BYG0 378 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 CEP41Q9BYV8 373 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 DZANK1Q9NVP4 752 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 CCDC195A0A1B0GUA6 201 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 MEI4A8MW99 385 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 SRP72O76094 671 aaKnown RBP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 CHRNA1P02708 482 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 GALTP07902 379 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 CYP4F8P98187 520 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 LBRQ14739 615 aaKnown RBP9.5□□□□□ -0.89
PTPRE-202ENST00000306042 HTR3CQ8WXA8 447 aa9.5□□□□□ -0.89
PTPRE-202ENST00000306042 OR8D1Q8WZ84 308 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms