RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 ATG14Q6ZNE5 492 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 NANOGNBQ7Z5D8 188 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 PATL1Q86TB9 770 aaKnown RBP8.18□□□□□ -1.1
NKRF-201ENST00000304449 CPNE9Q8IYJ1 553 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 DNERQ8NFT8 737 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 GRIN3AQ8TCU5 1115 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 PPP4R1Q8TF05 950 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 LRGUKQ96M69 825 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 C7orf26Q96N11 449 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 COPS7BQ9H9Q2 264 aaPredicted RBP8.18□□□□□ -1.1
NKRF-201ENST00000304449 PCDH18Q9HCL0 1135 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 HMGXB4Q9UGU5 601 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 GTF2IRD1Q9UHL9 959 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 TCEAL9Q9UHQ7 104 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 AGTPBP1Q9UPW5 1226 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 AP4B1Q9Y6B7 739 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 MAP3K6O95382 1288 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 PFKMP08237 780 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 COL6A2P12110 1019 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 UBA1P22314 1058 aaKnown RBP8.18□□□□□ -1.1
NKRF-201ENST00000304449 HOXD11P31277 338 aaPredicted RBP8.18□□□□□ -1.1
NKRF-201ENST00000304449 GJA8P48165 433 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 MMRN1Q13201 1228 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 CCNIQ14094 377 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 DUOXA2Q1HG44 320 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 C6orf183Q5T699 404 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 MAP3K21Q5TCX8 1036 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 TMCO4Q5TGY1 634 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 EMC1Q8N766 993 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 LRRN4Q8WUT4 740 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 KHSRPQ92945 711 aaKnown RBP eCLIP8.18□□□□□ -1.1
NKRF-201ENST00000304449 DCUN1D1Q96GG9 259 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 CCT7Q99832 543 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 CCDC106Q9BWC9 280 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 PAIP1Q9H074 479 aaKnown RBP8.18□□□□□ -1.1
NKRF-201ENST00000304449 BRD8Q9H0E9 1235 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 FZD8Q9H461 694 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 VRTNQ9H8Y1 702 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 MAN1C1Q9NR34 630 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 PLLPQ9Y342 182 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 MAD1L1Q9Y6D9 718 aa8.18□□□□□ -1.1
NKRF-201ENST00000304449 AIM2O14862 343 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 STRNO43815 780 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 ATP9BO43861 1147 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 IQCF3P0C7M6 154 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 ZNF24P17028 368 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 RPL10P27635 214 aaKnown RBP8.17□□□□□ -1.1
NKRF-201ENST00000304449 STIP1P31948 543 aaKnown RBP8.17□□□□□ -1.1
NKRF-201ENST00000304449 EMP3P54852 163 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 SP4Q02446 784 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 NBPF12Q5TAG4 269 aaPredicted RBP8.17□□□□□ -1.1
NKRF-201ENST00000304449 MROH9Q5TGP6 573 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 ANGEL2Q5VTE6 544 aaKnown RBP8.17□□□□□ -1.1
NKRF-201ENST00000304449 DNAJC14Q6Y2X3 702 aaPredicted RBP8.17□□□□□ -1.1
NKRF-201ENST00000304449 UTS2BQ765I0 119 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 LPCAT2Q7L5N7 544 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 PQLC3Q8N755 202 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 PLD5Q8N7P1 536 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 ZNF280CQ8ND82 737 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 RSAD2Q8WXG1 361 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 FAF2Q96CS3 445 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 CORO1BQ9BR76 489 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 ELOVL4Q9GZR5 314 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 ACAD9Q9H845 621 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 RRN3Q9NYV6 651 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 NDUFA13Q9P0J0 144 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 CIDEBQ9UHD4 219 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 TBC1D30Q9Y2I9 924 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 IQANK1A0A1B0GTG1 560 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 C2CD4BA6NLJ0 364 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 SPTLC1O15269 473 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 CILPO75339 1184 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 COPAP53621 1224 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 HDAC4P56524 1084 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 EIF3EP60228 445 aaKnown RBP8.17□□□□□ -1.1
NKRF-201ENST00000304449 TBL3Q12788 808 aaKnown RBP8.17□□□□□ -1.1
NKRF-201ENST00000304449 FAXCQ5TGI0 409 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 SLC9A4Q6AI14 798 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 C16orf46Q6P387 395 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 TMEM110Q86TL2 294 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 TMEM192Q8IY95 271 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 PDIK1LQ8N165 341 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 SLC7A3Q8WY07 619 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 PIWIL1Q96J94 861 aaKnown RBP8.17□□□□□ -1.1
NKRF-201ENST00000304449 TEX13BQ9BXU2 312 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 PDGFDQ9GZP0 370 aaPredicted RBP8.17□□□□□ -1.1
NKRF-201ENST00000304449 ACSS2Q9NR19 701 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 USP18Q9UMW8 372 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 POMPQ9Y244 141 aa8.17□□□□□ -1.1
NKRF-201ENST00000304449 ANKRD12Q6UB98 2062 aa8.16□□□□□ -1.1
NKRF-201ENST00000304449 F5H423 210 aaPredicted RBP8.16□□□□□ -1.1
NKRF-201ENST00000304449 SPAG6O75602 509 aa8.16□□□□□ -1.1
NKRF-201ENST00000304449 GABBR2O75899 941 aa8.16□□□□□ -1.1
NKRF-201ENST00000304449 CRTAMO95727 393 aa8.16□□□□□ -1.1
NKRF-201ENST00000304449 PRKCGP05129 697 aa8.16□□□□□ -1.1
NKRF-201ENST00000304449 RBP3P10745 1247 aa8.16□□□□□ -1.1
NKRF-201ENST00000304449 FGFR3P22607 806 aa8.16□□□□□ -1.1
NKRF-201ENST00000304449 NFKBIAP25963 317 aa8.16□□□□□ -1.1
NKRF-201ENST00000304449 HOXD12P35452 270 aa8.16□□□□□ -1.1
NKRF-201ENST00000304449 CPOXP36551 454 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms