RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 CAPS2Q9BXY5 557 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 EIF3HO15372 352 aaKnown RBP eCLIP23■■□□□ 1.27
SMAD1-201ENST00000302085 MSI1O43347 362 aaKnown RBP23■■□□□ 1.27
SMAD1-201ENST00000302085 SHOX2O60902 331 aaPredicted RBP23■■□□□ 1.27
SMAD1-201ENST00000302085 HAPLN1P10915 354 aaPredicted RBP23■■□□□ 1.27
SMAD1-201ENST00000302085 ITGB8P26012 769 aa23■■□□□ 1.27
SMAD1-201ENST00000302085 RFC2P35250 354 aa23■■□□□ 1.27
SMAD1-201ENST00000302085 MAGEA6P43360 314 aa23■■□□□ 1.27
SMAD1-201ENST00000302085 PDK1Q15118 436 aa23■■□□□ 1.27
SMAD1-201ENST00000302085 HEATR6Q6AI08 1181 aaKnown RBP23■■□□□ 1.27
SMAD1-201ENST00000302085 C4orf22Q6V702 233 aa23■■□□□ 1.27
SMAD1-201ENST00000302085 SPPL2BQ8TCT7 592 aa23■■□□□ 1.27
SMAD1-201ENST00000302085 SERPINB12Q96P63 405 aa23■■□□□ 1.27
SMAD1-201ENST00000302085 GMIPQ9P107 970 aa23■■□□□ 1.27
SMAD1-201ENST00000302085 LRIG2O94898 1065 aa23■■□□□ 1.27
SMAD1-201ENST00000302085 CAPN2P17655 700 aa23■■□□□ 1.27
SMAD1-201ENST00000302085 ZNF135P52742 658 aaPredicted RBP23■■□□□ 1.27
SMAD1-201ENST00000302085 SMARCB1Q12824 385 aa23■■□□□ 1.27
SMAD1-201ENST00000302085 STAT4Q14765 748 aa23■■□□□ 1.27
SMAD1-201ENST00000302085 BRMS1LQ5PSV4 323 aa23■■□□□ 1.27
SMAD1-201ENST00000302085 TTC19Q6DKK2 380 aaPredicted RBP23■■□□□ 1.27
SMAD1-201ENST00000302085 PRDM12Q9H4Q4 367 aa23■■□□□ 1.27
SMAD1-201ENST00000302085 C11orf49Q9H6J7 331 aa23■■□□□ 1.27
SMAD1-201ENST00000302085 A0A087WUV0 522 aaPredicted RBP22.99■■□□□ 1.27
SMAD1-201ENST00000302085 FAM92AA1XBS5 289 aa22.99■■□□□ 1.27
SMAD1-201ENST00000302085 ADAM12O43184 909 aa22.99■■□□□ 1.27
SMAD1-201ENST00000302085 AGTP01019 485 aa22.99■■□□□ 1.27
SMAD1-201ENST00000302085 GPX6P59796 221 aa22.99■■□□□ 1.27
SMAD1-201ENST00000302085 PPP2R2AP63151 447 aa22.99■■□□□ 1.27
SMAD1-201ENST00000302085 MTM1Q13496 603 aa22.99■■□□□ 1.27
SMAD1-201ENST00000302085 PDIK1LQ8N165 341 aa22.99■■□□□ 1.27
SMAD1-201ENST00000302085 ANKLE1Q8NAG6 615 aa22.99■■□□□ 1.27
SMAD1-201ENST00000302085 TOP1MTQ969P6 601 aa22.99■■□□□ 1.27
SMAD1-201ENST00000302085 EPAS1Q99814 870 aa22.99■■□□□ 1.27
SMAD1-201ENST00000302085 OXCT2Q9BYC2 517 aaPredicted RBP22.99■■□□□ 1.27
SMAD1-201ENST00000302085 KLC2Q9H0B6 622 aa22.99■■□□□ 1.27
SMAD1-201ENST00000302085 COL4A6Q14031 1691 aa22.99■■□□□ 1.27
SMAD1-201ENST00000302085 YWHAQP27348 245 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 GLUD2P49448 558 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 IRAK1P51617 712 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 AP1B1Q10567 949 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 DUSP4Q13115 394 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 BBS9Q3SYG4 887 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 MGAT5BQ3V5L5 792 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 PDZD4Q76G19 769 aaPredicted RBP22.98■■□□□ 1.27
SMAD1-201ENST00000302085 TMCO2Q7Z6W1 182 aaPredicted RBP22.98■■□□□ 1.27
SMAD1-201ENST00000302085 NPWQ8N729 165 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 P2RY11Q96G91 374 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 IGSF21Q96ID5 467 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 SPATA17Q96L03 361 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 HAPLN3Q96S86 360 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 SEPT5Q99719 369 aaPredicted RBP22.98■■□□□ 1.27
SMAD1-201ENST00000302085 CCDC77Q9BR77 488 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 CDY1Q9Y6F8 540 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 PLXNA3P51805 1871 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 MYO16Q9Y6X6 1858 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 CLUHO75153 1309 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 TRIM43BA6NCK2 446 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 EPHB2P29323 1055 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 CCR1P32246 355 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 CBLBQ13191 982 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 ANKRD20A2Q5SQ80 823 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 ANKRD20A1Q5TYW2 823 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 ANKRD20A3Q5VUR7 823 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 MSANTD2Q6P1R3 559 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 DENND5BQ6ZUT9 1274 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 RNF168Q8IYW5 571 aaPredicted RBP22.98■■□□□ 1.27
SMAD1-201ENST00000302085 ARHGAP18Q8N392 663 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 ARFGAP2Q8N6H7 521 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 CCNYQ8ND76 341 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 FBXO22Q8NEZ5 403 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 PYROXD1Q8WU10 500 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 TRIM43Q96BQ3 446 aaPredicted RBP22.98■■□□□ 1.27
SMAD1-201ENST00000302085 SIK2Q9H0K1 926 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 VPS37BQ9H9H4 285 aa22.98■■□□□ 1.27
SMAD1-201ENST00000302085 A0A0A0MRY4 1105 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 ABHD14A-ACY1A0A1B0GW23 586 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 KCNU1A8MYU2 1149 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 PAGE1O75459 146 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 GNGT1P63211 74 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 PPARDQ03181 441 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 PPP2R5DQ14738 602 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 USP41Q3LFD5 358 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 ARTNQ5T4W7 220 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 CAPN12Q6ZSI9 719 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 IGDCC3Q8IVU1 814 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 VPS52Q8N1B4 723 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 FBXO36Q8NEA4 188 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 C2orf15Q8WU43 125 aaKnown RBP22.97■■□□□ 1.27
SMAD1-201ENST00000302085 SPATA13Q96N96 652 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 MTRRQ9UBK8 725 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 CTNNAL1Q9UBT7 734 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 RAD54BQ9Y620 910 aa22.97■■□□□ 1.27
SMAD1-201ENST00000302085 PPP1R12AO14974 1030 aaPredicted RBP22.96■■□□□ 1.27
SMAD1-201ENST00000302085 AVILO75366 819 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 RTN3O95197 1032 aaPredicted RBP22.96■■□□□ 1.27
SMAD1-201ENST00000302085 TIMP1P01033 207 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 RPL17P18621 184 aaKnown RBP22.96■■□□□ 1.27
SMAD1-201ENST00000302085 GUCY1A3Q02108 690 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 PPP1R21Q6ZMI0 780 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms