RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 GIPC2Q8TF65 315 aa16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 ZBTB9Q96C00 473 aa16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 OLFM3Q96PB7 478 aa16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 QKIQ96PU8 341 aaKnown RBP eCLIP16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 TTLL2Q9BWV7 592 aa16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 NUDT5Q9UKK9 219 aa16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 ZMYND8Q9ULU4 1186 aaPredicted RBP16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 INSL6Q9Y581 213 aa16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 GOLGA6L10A6NI86 522 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 PPP1R12AO14974 1030 aaPredicted RBP16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 DCLK1O15075 740 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 MFSD11O43934 449 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 ERCC2P18074 760 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 SERPINB6P35237 376 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 EIF3BP55884 814 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 HEATR6Q6AI08 1181 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 B4GALNT4Q76KP1 1039 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 PDZD8Q8NEN9 1154 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 CDK5RAP1Q96SZ6 601 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 SH3GL2Q99962 352 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 UBE2OQ9C0C9 1292 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 MAGED2Q9UNF1 606 aaPredicted RBP16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 SSX2IPQ9Y2D8 614 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 GOLGA8KD6RF30 607 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 NCAM2O15394 837 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 LRIG2O94898 1065 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 EPHB2P29323 1055 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 CHKAP35790 457 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 ALDH1A3P47895 512 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 TBX4P57082 545 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 IFFO1Q0D2I5 559 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 RAB33AQ14088 237 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 TADA2BQ86TJ2 420 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 OVCA2Q8WZ82 227 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 SEMA4AQ9H3S1 761 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 CYP4F11Q9HBI6 524 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 MAFFQ9ULX9 164 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 MFHAS1Q9Y4C4 1052 aa16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 FARP1Q9Y4F1 1045 aaPredicted RBP16.22■□□□□ 0.19
HERPUD1-201ENST00000300302 GREB1Q4ZG55 1949 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 ZNF638Q14966 1978 aaKnown RBP16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 KCNU1A8MYU2 1149 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 PAGE1O75459 146 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 STK10O94804 968 aaKnown RBP16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 APOEP02649 317 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 NUDT17P0C025 328 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 ZDHHC11BP0C7U3 371 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 CSH1P0DML2 217 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 CSH2P0DML3 217 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 ELF1P32519 619 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 BASP1P80723 227 aaKnown RBP16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 EFEMP1Q12805 493 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 C10orf120Q5SQS8 335 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 CEP85LQ5SZL2 805 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 RASIP1Q5U651 963 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 RELL1Q8IUW5 271 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 ABHD8Q96I13 439 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 RBM15Q96T37 977 aaKnown RBP eCLIP16.21■□□□□ 0.192e-8■■■■□ 24.1
HERPUD1-201ENST00000300302 SIK2Q9H0K1 926 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 FNIP2Q9P278 1114 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 SLC12A6Q9UHW9 1150 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 PTPRSQ13332 1948 aa16.21■□□□□ 0.19
HERPUD1-201ENST00000300302 H0YGN5 161 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 FGF10O15520 208 aaPredicted RBP16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 RIPK2O43353 540 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 RNF40O75150 1001 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 GCATO75600 419 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 FGF18O76093 207 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 SEC24AO95486 1093 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 MX2P20592 715 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 DNAJB2P25686 324 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 VEPH1Q14D04 833 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 TAF12Q16514 161 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 HTR3CQ8WXA8 447 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 CPT1BQ92523 772 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 PRCCQ92733 491 aaPredicted RBP16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 SLC39A13Q96H72 371 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 FCRL2Q96LA5 508 aaPredicted RBP16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 BRD8Q9H0E9 1235 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 CDC42EP4Q9H3Q1 356 aaKnown RBP16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 CATSPERBQ9H7T0 1116 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 MARCH2Q9P0N8 246 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 NFS1Q9Y697 457 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 C5orf60A6NFR6 353 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 PRRG1O14668 218 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 SRGAP2BP0DMP2 458 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 KPNA1P52294 538 aaPredicted RBP16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 NRG1Q02297 640 aaPredicted RBP16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 AP1B1Q10567 949 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 MTA1Q13330 715 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 TRIP4Q15650 581 aaPredicted RBP16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 TMEM240Q5SV17 173 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 ACBD5Q5T8D3 534 aaPredicted RBP16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 RWDD4Q6NW29 188 aaKnown RBP16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 CENPUQ71F23 418 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 ZNF276Q8N554 614 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 ATP6V0D2Q8N8Y2 350 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms