RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 SRGAP2BP0DMP2 458 aa26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 EFTUD2Q15029 972 aaKnown RBP eCLIP26.47■■□□□ 1.831e-6■■■■□ 23.2
SDCCAG3-201ENST00000298537 HEATR6Q6AI08 1181 aaKnown RBP26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 HTR3CQ8WXA8 447 aa26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 FUBP3Q96I24 572 aaKnown RBP eCLIP26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 CHMP2BQ9UQN3 213 aa26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 TBX18O95935 607 aa26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 GRIA1P42261 906 aa26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 PAFAH1B3Q15102 231 aaKnown RBP26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 LRRC26Q2I0M4 334 aa26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 ARL13BQ3SXY8 428 aa26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 LRRC31Q6UY01 552 aa26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 DENND5BQ6ZUT9 1274 aa26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 P2RY11Q96G91 374 aa26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 PAWRQ96IZ0 340 aaKnown RBP26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 SEPT10Q9P0V9 454 aa26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 CDY1Q9Y6F8 540 aa26.47■■□□□ 1.83
SDCCAG3-201ENST00000298537 MYO18AQ92614 2054 aaKnown RBP26.46■■□□□ 1.83
SDCCAG3-201ENST00000298537 DUSP4Q13115 394 aa26.46■■□□□ 1.83
SDCCAG3-201ENST00000298537 MGAT5BQ3V5L5 792 aa26.46■■□□□ 1.83
SDCCAG3-201ENST00000298537 VSTM1Q6UX27 236 aa26.46■■□□□ 1.83
SDCCAG3-201ENST00000298537 LRRC43Q8N309 656 aa26.46■■□□□ 1.83
SDCCAG3-201ENST00000298537 C8orf48Q96LL4 319 aa26.46■■□□□ 1.83
SDCCAG3-201ENST00000298537 SERPINB12Q96P63 405 aa26.46■■□□□ 1.83
SDCCAG3-201ENST00000298537 MRPL9Q9BYD2 267 aaKnown RBP26.46■■□□□ 1.83
SDCCAG3-201ENST00000298537 ROPN1BQ9BZX4 212 aaPredicted RBP26.46■■□□□ 1.83
SDCCAG3-201ENST00000298537 CWH43Q9H720 699 aa26.46■■□□□ 1.83
SDCCAG3-201ENST00000298537 ROPN1Q9HAT0 212 aaPredicted RBP26.46■■□□□ 1.83
SDCCAG3-201ENST00000298537 E7ESA3 106 aa26.45■■□□□ 1.83
SDCCAG3-201ENST00000298537 HOXA2O43364 376 aa26.45■■□□□ 1.83
SDCCAG3-201ENST00000298537 EPHB2P29323 1055 aa26.45■■□□□ 1.83
SDCCAG3-201ENST00000298537 EXOC3L1Q86VI1 746 aa26.45■■□□□ 1.83
SDCCAG3-201ENST00000298537 PYROXD1Q8WU10 500 aa26.45■■□□□ 1.83
SDCCAG3-201ENST00000298537 TRIM56Q9BRZ2 755 aaKnown RBP26.45■■□□□ 1.83
SDCCAG3-201ENST00000298537 NEU3Q9UQ49 428 aa26.45■■□□□ 1.83
SDCCAG3-201ENST00000298537 COL4A6Q14031 1691 aa26.45■■□□□ 1.83
SDCCAG3-201ENST00000298537 NUP205Q92621 2012 aa26.45■■□□□ 1.83
SDCCAG3-201ENST00000298537 KCNK1O00180 336 aa26.45■■□□□ 1.82
SDCCAG3-201ENST00000298537 C2CD2LO14523 706 aa26.45■■□□□ 1.82
SDCCAG3-201ENST00000298537 GCATO75600 419 aa26.45■■□□□ 1.82
SDCCAG3-201ENST00000298537 MOCS2O96007 188 aaPredicted RBP26.45■■□□□ 1.82
SDCCAG3-201ENST00000298537 AIF1P55008 147 aa26.45■■□□□ 1.82
SDCCAG3-201ENST00000298537 PRKD1Q15139 912 aaPredicted RBP26.45■■□□□ 1.82
SDCCAG3-201ENST00000298537 ARTNQ5T4W7 220 aa26.45■■□□□ 1.82
SDCCAG3-201ENST00000298537 MFSD5Q6N075 450 aa26.45■■□□□ 1.82
SDCCAG3-201ENST00000298537 CELF6Q96J87 481 aaKnown RBP26.45■■□□□ 1.82
SDCCAG3-201ENST00000298537 TTPALQ9BTX7 342 aa26.45■■□□□ 1.82
SDCCAG3-201ENST00000298537 SMOC2Q9H3U7 446 aa26.45■■□□□ 1.82
SDCCAG3-201ENST00000298537 ZMYND8Q9ULU4 1186 aaPredicted RBP26.45■■□□□ 1.82
SDCCAG3-201ENST00000298537 OR6C75A6NL08 312 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 MDH1P40925 334 aaKnown RBP26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 ELK3P41970 407 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 DEFB103AP81534 67 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 ANKRD20A2Q5SQ80 823 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 ANKRD20A1Q5TYW2 823 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 ANKRD20A3Q5VUR7 823 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 FOXR1Q6PIV2 292 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 CAND1Q86VP6 1230 aaKnown RBP26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 SCML2Q9UQR0 700 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 POC1B-GALNT4F8VUJ3 575 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 CHADO15335 359 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 IKBKEQ14164 716 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 PDIK1LQ8N165 341 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 GIPC2Q8TF65 315 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 SELENOSQ9BQE4 189 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 TMEM175Q9BSA9 504 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 ARHGEF38Q9NXL2 777 aa26.44■■□□□ 1.82
SDCCAG3-201ENST00000298537 A0A087WUV0 522 aaPredicted RBP26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 C5orf60A6NFR6 353 aa26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 RNF103O00237 685 aa26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 TRIM66O15016 1216 aa26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 PAGE1O75459 146 aa26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 AGTP01019 485 aa26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 ABHD2P08910 425 aa26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 WASHC5Q12768 1159 aa26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 GPR17Q13304 367 aa26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 ZNF534Q76KX8 674 aa26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 EURLQ9NYK6 297 aa26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 EXOC1LA0A1B0GW35 172 aa26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 WDR27A2RRH5 827 aa26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 RASIP1Q5U651 963 aa26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 RWDD4Q6NW29 188 aaKnown RBP26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 KLC2Q9H0B6 622 aa26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 PIH1D1Q9NWS0 290 aaKnown RBP26.43■■□□□ 1.82
SDCCAG3-201ENST00000298537 CSF2RAP15509 400 aa26.42■■□□□ 1.82
SDCCAG3-201ENST00000298537 ALDH7A1P49419 539 aaKnown RBP26.42■■□□□ 1.82
SDCCAG3-201ENST00000298537 ARHGEF18Q6ZSZ5 1173 aa26.42■■□□□ 1.82
SDCCAG3-201ENST00000298537 BEND5Q7L4P6 421 aa26.42■■□□□ 1.82
SDCCAG3-201ENST00000298537 PRDM5Q9NQX1 630 aaPredicted RBP26.42■■□□□ 1.82
SDCCAG3-201ENST00000298537 TRIM43BA6NCK2 446 aa26.42■■□□□ 1.82
SDCCAG3-201ENST00000298537 EIF3HO15372 352 aaKnown RBP eCLIP26.42■■□□□ 1.82
SDCCAG3-201ENST00000298537 CLTBP09497 229 aa26.42■■□□□ 1.82
SDCCAG3-201ENST00000298537 LSP1P33241 339 aa26.42■■□□□ 1.82
SDCCAG3-201ENST00000298537 MAGEA11P43364 429 aa26.42■■□□□ 1.82
SDCCAG3-201ENST00000298537 SEC24CP53992 1094 aa26.42■■□□□ 1.82
SDCCAG3-201ENST00000298537 TAF10Q12962 218 aa26.42■■□□□ 1.82
SDCCAG3-201ENST00000298537 CNKSR3Q6P9H4 555 aa26.42■■□□□ 1.82
SDCCAG3-201ENST00000298537 C3orf62Q6ZUJ4 267 aa26.42■■□□□ 1.82
SDCCAG3-201ENST00000298537 C14orf80Q86SX3 495 aa26.42■■□□□ 1.82
SDCCAG3-201ENST00000298537 MON1AQ86VX9 555 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms