RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 LEMD2Q8NC56 503 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 ZNF397Q8NF99 534 aaPredicted RBP6.17□□□□□ -1.42
SSX3-201ENST00000298396 JOSD2Q8TAC2 188 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 ATRIPQ8WXE1 791 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 RSAD2Q8WXG1 361 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 IRGQQ8WZA9 623 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 EDEM1Q92611 657 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 FGF14Q92915 247 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 USP13Q92995 863 aaPredicted RBP6.17□□□□□ -1.42
SSX3-201ENST00000298396 P2RY11Q96G91 374 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 ASB16Q96NS5 453 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 NECTIN4Q96NY8 510 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 RPP25Q9BUL9 199 aaKnown RBP6.17□□□□□ -1.42
SSX3-201ENST00000298396 PHF7Q9BWX1 381 aaPredicted RBP6.17□□□□□ -1.42
SSX3-201ENST00000298396 DNAI2Q9GZS0 605 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 KCNF1Q9H3M0 494 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 ATXN3LQ9H3M9 355 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 FBXO44Q9H4M3 255 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 TRPV4Q9HBA0 871 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 LRRC4Q9HBW1 653 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 CNGB3Q9NQW8 809 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 SEPT11Q9NVA2 429 aaKnown RBP6.17□□□□□ -1.42
SSX3-201ENST00000298396 TRPM5Q9NZQ8 1165 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 ADAM22Q9P0K1 906 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 EPS15L1Q9UBC2 864 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 UXTQ9UBK9 157 aaPredicted RBP6.17□□□□□ -1.42
SSX3-201ENST00000298396 KLF15Q9UIH9 416 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 DCTN4Q9UJW0 460 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 NAGPAQ9UK23 515 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 TMEM59LQ9UK28 342 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 CDH7Q9ULB5 785 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 TFR2Q9UP52 801 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 MRPS23Q9Y3D9 190 aaKnown RBP6.17□□□□□ -1.42
SSX3-201ENST00000298396 BZW2Q9Y6E2 419 aaKnown RBP6.17□□□□□ -1.42
SSX3-201ENST00000298396 ANKRD36A6QL64 1941 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 CACNA1IQ9P0X4 2223 aa6.17□□□□□ -1.42
SSX3-201ENST00000298396 MUC22E2RYF6 1773 aaPredicted RBP6.16□□□□□ -1.42
SSX3-201ENST00000298396 ANHXE9PGG2 379 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 GOLGA8SH3BPF8 625 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 I6L893 689 aaPredicted RBP6.16□□□□□ -1.42
SSX3-201ENST00000298396 ZNF197O14709 1029 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 MSI1O43347 362 aaKnown RBP6.16□□□□□ -1.42
SSX3-201ENST00000298396 TLR5O60602 858 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 SIN3BO75182 1162 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 RTN2O75298 545 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 DAB1O75553 588 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 FGF19O95750 216 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 IGLV3-25P01717 112 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 TPM1P09493 284 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 CCDC172P0C7W6 258 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 LAMP2P13473 410 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 RARGP13631 454 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 VIPR2P41587 438 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 NSFP46459 744 aaKnown RBP6.16□□□□□ -1.42
SSX3-201ENST00000298396 TUBP50607 506 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 GALCP54803 685 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 SLC8A3P57103 927 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 RPL7AP62424 266 aaKnown RBP6.16□□□□□ -1.42
SSX3-201ENST00000298396 SLC7A9P82251 487 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 MAMLD1Q13495 774 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 CCINQ13939 588 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 ZNF268Q14587 947 aaPredicted RBP6.16□□□□□ -1.42
SSX3-201ENST00000298396 ZNF77Q15935 545 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 TAF12Q16514 161 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 HECTD3Q5T447 861 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 FAM102AQ5T9C2 384 aaPredicted RBP6.16□□□□□ -1.42
SSX3-201ENST00000298396 TANGO2Q6ICL3 276 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 PLEKHA7Q6IQ23 1121 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 ALKBH5Q6P6C2 394 aaKnown RBP6.16□□□□□ -1.42
SSX3-201ENST00000298396 VITQ6UXI7 678 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 TAC4Q86UU9 113 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 CPNE8Q86YQ8 564 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 FMNL3Q8IVF7 1028 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 ARID3BQ8IVW6 561 aaPredicted RBP6.16□□□□□ -1.42
SSX3-201ENST00000298396 RGL4Q8IZJ4 473 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 CMTM8Q8IZV2 173 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 EMC1Q8N766 993 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 ACRBPQ8NEB7 543 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 PDZD8Q8NEN9 1154 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 ZSCAN18Q8TBC5 510 aaPredicted RBP6.16□□□□□ -1.42
SSX3-201ENST00000298396 DQX1Q8TE96 717 aaKnown RBP6.16□□□□□ -1.42
SSX3-201ENST00000298396 NT5C3BQ969T7 300 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 ALKBH8Q96BT7 664 aaKnown RBP6.16□□□□□ -1.42
SSX3-201ENST00000298396 C18orf8Q96DM3 657 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 ASIC4Q96FT7 647 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 NECAB3Q96P71 396 aaPredicted RBP6.16□□□□□ -1.42
SSX3-201ENST00000298396 SLITRK1Q96PX8 696 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 ASB2Q96Q27 587 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 KXD1Q9BQD3 176 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.16□□□□□ -1.42
SSX3-201ENST00000298396 THAP2Q9H0W7 228 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 PDCL3Q9H2J4 239 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 SMOC2Q9H3U7 446 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 TASP1Q9H6P5 420 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 TRPC7Q9HCX4 862 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 TLR8Q9NR97 1041 aaKnown RBP6.16□□□□□ -1.42
SSX3-201ENST00000298396 METTL5Q9NRN9 209 aaKnown RBP6.16□□□□□ -1.42
SSX3-201ENST00000298396 GKN1Q9NS71 199 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 ASNSD1Q9NWL6 643 aa6.16□□□□□ -1.42
SSX3-201ENST00000298396 CLIC5Q9NZA1 410 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms