RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ZNF432O94892 652 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 ZBTB7AO95365 584 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 FOXO4P98177 505 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 CHRNB3Q05901 458 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 ANKS1AQ92625 1134 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 CLPBQ9H078 707 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 EPB41L4BQ9H329 900 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 ZC3H11AO75152 810 aaKnown RBP eCLIP12.34□□□□□ -0.438e-19■■■□□ 16.8
PCF11-201ENST00000298281 H2AFXP16104 143 aaPredicted RBP12.34□□□□□ -0.43
PCF11-201ENST00000298281 DNAJB2P25686 324 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 IST1P53990 364 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 CRB1P82279 1406 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 MRPS31Q92665 395 aaKnown RBP12.34□□□□□ -0.43
PCF11-201ENST00000298281 AP1S3Q96PC3 154 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 EFCAB1Q9HAE3 211 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 ZNF839A8K0R7 811 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 GTPBP1O00178 669 aaKnown RBP12.34□□□□□ -0.43
PCF11-201ENST00000298281 GPR182O15218 404 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 THRAP10827 490 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 CASP4P49662 377 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 ZNF248Q8NDW4 579 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 MS4A14Q96JA4 679 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 CDK5RAP1Q96SZ6 601 aaKnown RBP12.34□□□□□ -0.43
PCF11-201ENST00000298281 INTS10Q9NVR2 710 aaKnown RBP12.34□□□□□ -0.43
PCF11-201ENST00000298281 AHSPQ9NZD4 102 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 TNS3Q68CZ2 1445 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 ARL5CA6NH57 179 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 OR5T3Q8NGG3 340 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 MCRS1Q96EZ8 462 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 DUSP12Q9UNI6 340 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 BCLAF3A2AJT9 711 aaKnown RBP12.34□□□□□ -0.43
PCF11-201ENST00000298281 ZNF879B4DU55 563 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 MCIDASD6RGH6 385 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 F5H5T6 163 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 SNAP23O00161 211 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 PDHBP11177 359 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 RPL10AP62906 217 aaKnown RBP12.34□□□□□ -0.43
PCF11-201ENST00000298281 GNASQ5JWF2 1037 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 HAVCR1Q96D42 359 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 ZNF518BQ9C0D4 1074 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 MYMKA6NI61 221 aa12.33□□□□□ -0.43
PCF11-201ENST00000298281 CCT8L1PA6NM43 557 aa12.33□□□□□ -0.43
PCF11-201ENST00000298281 WRBO00258 174 aa12.33□□□□□ -0.43
PCF11-201ENST00000298281 SSNA1O43805 119 aa12.33□□□□□ -0.43
PCF11-201ENST00000298281 SERPINB8P50452 374 aa12.33□□□□□ -0.43
PCF11-201ENST00000298281 ITGA8P53708 1063 aa12.33□□□□□ -0.43
PCF11-201ENST00000298281 IRX1P78414 480 aaPredicted RBP12.33□□□□□ -0.43
PCF11-201ENST00000298281 STK4Q13043 487 aa12.33□□□□□ -0.43
PCF11-201ENST00000298281 ZNF846Q147U1 533 aa12.33□□□□□ -0.43
PCF11-201ENST00000298281 ACAD10Q6JQN1 1059 aa12.33□□□□□ -0.43
PCF11-201ENST00000298281 COL23A1Q86Y22 540 aaPredicted RBP12.33□□□□□ -0.43
PCF11-201ENST00000298281 USP38Q8NB14 1042 aa12.33□□□□□ -0.43
PCF11-201ENST00000298281 USP18Q9UMW8 372 aa12.33□□□□□ -0.43
PCF11-201ENST00000298281 TIMM8BQ9Y5J9 83 aaPredicted RBP12.33□□□□□ -0.43
PCF11-201ENST00000298281 ADCY10Q96PN6 1610 aa12.33□□□□□ -0.43
PCF11-201ENST00000298281 ABCA8O94911 1581 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 FAM20BO75063 409 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 TAB1Q15750 504 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 RFT1Q96AA3 541 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 IL17RAQ96F46 866 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 ERGIC2Q96RQ1 377 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 OMDQ99983 421 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.33□□□□□ -0.44
PCF11-201ENST00000298281 USP42Q9H9J4 1324 aaKnown RBP12.33□□□□□ -0.44
PCF11-201ENST00000298281 AKT2P31751 481 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 MTTPP55157 894 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 CHI3L2Q15782 390 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 FAM228AQ86W67 206 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 MYO1HQ8N1T3 1032 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 VPS51Q9UID3 782 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 REREQ9P2R6 1566 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 IL5RAQ01344 420 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 ANKRD13AQ8IZ07 590 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 IGDCC4Q8TDY8 1250 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 PCDHB12Q9Y5F1 795 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 NPHP3-ACAD11A0A0J9YXS1 232 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 LIN7AO14910 233 aaPredicted RBP12.33□□□□□ -0.44
PCF11-201ENST00000298281 SERPINB5P36952 375 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 VHLP40337 213 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 RAB25P57735 213 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 CRYMQ14894 314 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 ITCHQ96J02 903 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 PDP2Q9P2J9 529 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 ENTPD4Q9Y227 616 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 MYH6P13533 1939 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 TSPAN19P0C672 248 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 OMPP47874 163 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 CHRDL2Q6WN34 429 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 CEP68Q76N32 757 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 MCOLN3Q8TDD5 553 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 KLHL32Q96NJ5 620 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 GPER1Q99527 375 aa12.33□□□□□ -0.44
PCF11-201ENST00000298281 FBXO21O94952 628 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 FCGR1AP12314 374 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 TFE3P19532 575 aaPredicted RBP12.32□□□□□ -0.44
PCF11-201ENST00000298281 COILP38432 576 aaPredicted RBP12.32□□□□□ -0.44
PCF11-201ENST00000298281 OR2L5Q8NG80 312 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 DDIT4Q9NX09 232 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 ZNF222Q9UK12 451 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 NCAM2O15394 837 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms