RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ZFRQ96KR1 1074 aaKnown RBP15.28■□□□□ 0.04
SPIDR-201ENST00000297423 LENG8Q96PV6 779 aaPredicted RBP15.28■□□□□ 0.04
SPIDR-201ENST00000297423 TBC1D22BQ9NU19 505 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 HSFX1Q9UBD0 423 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 GABBR1Q9UBS5 961 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 TJP2Q9UDY2 1190 aa15.28■□□□□ 0.04
SPIDR-201ENST00000297423 WARS2Q9UGM6 360 aaKnown RBP15.28■□□□□ 0.04
SPIDR-201ENST00000297423 AGO2Q9UKV8 859 aaKnown RBP15.28■□□□□ 0.04
SPIDR-201ENST00000297423 IGLV3-22A0A075B6J6 115 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 CALB1P05937 261 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 EPHA3P29320 983 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 GTF2A2P52657 109 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 NR1H2P55055 460 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 TKFCQ3LXA3 575 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 LRRC8EQ6NSJ5 796 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 BNC2Q6ZN30 1099 aaPredicted RBP15.27■□□□□ 0.04
SPIDR-201ENST00000297423 FBXW8Q8N3Y1 598 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 CCNYQ8ND76 341 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 GRIN3AQ8TCU5 1115 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 CDKL2Q92772 493 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 SGF29Q96ES7 293 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 FERMT1Q9BQL6 677 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 BUD23O43709 281 aaKnown RBP15.27■□□□□ 0.04
SPIDR-201ENST00000297423 RALBP11234 206 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 NLRP11P59045 1033 aaKnown RBP15.27■□□□□ 0.04
SPIDR-201ENST00000297423 GEN1Q17RS7 908 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 ANKDD1AQ495B1 522 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 ARMCX6Q7L4S7 300 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 METTL25Q8N6Q8 603 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 DDI1Q8WTU0 396 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 CDCA5Q96FF9 252 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 BCAP29Q9UHQ4 241 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 AFG3L2Q9Y4W6 797 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 PCDHGA4Q9Y5G9 962 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 SNCAIPQ9Y6H5 919 aa15.27■□□□□ 0.04
SPIDR-201ENST00000297423 APOEP02649 317 aa15.27■□□□□ 0.03
SPIDR-201ENST00000297423 BPGMP07738 259 aa15.27■□□□□ 0.03
SPIDR-201ENST00000297423 KRT7P08729 469 aa15.27■□□□□ 0.03
SPIDR-201ENST00000297423 NR4A1P22736 598 aa15.27■□□□□ 0.03
SPIDR-201ENST00000297423 GPC3P51654 580 aa15.27■□□□□ 0.03
SPIDR-201ENST00000297423 NOL9Q5SY16 702 aaKnown RBP15.27■□□□□ 0.03
SPIDR-201ENST00000297423 TTC33Q6PID6 262 aaPredicted RBP15.27■□□□□ 0.03
SPIDR-201ENST00000297423 MON1BQ7L1V2 547 aa15.27■□□□□ 0.03
SPIDR-201ENST00000297423 ERO1BQ86YB8 467 aa15.27■□□□□ 0.03
SPIDR-201ENST00000297423 THNSL1Q8IYQ7 743 aa15.27■□□□□ 0.03
SPIDR-201ENST00000297423 JOSD2Q8TAC2 188 aa15.27■□□□□ 0.03
SPIDR-201ENST00000297423 RCN3Q96D15 328 aa15.27■□□□□ 0.03
SPIDR-201ENST00000297423 C12orf42Q96LP6 360 aa15.27■□□□□ 0.03
SPIDR-201ENST00000297423 TARS2Q9BW92 718 aaKnown RBP15.27■□□□□ 0.03
SPIDR-201ENST00000297423 MRPS26Q9BYN8 205 aaKnown RBP15.27■□□□□ 0.03
SPIDR-201ENST00000297423 DDX56Q9NY93 547 aaKnown RBP15.27■□□□□ 0.03
SPIDR-201ENST00000297423 COL20A1Q9P218 1284 aa15.27■□□□□ 0.03
SPIDR-201ENST00000297423 PRPSAP2O60256 369 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 COQ9O75208 318 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 NR3C2P08235 984 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 CSH1P0DML2 217 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 CSH2P0DML3 217 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 P4HA1P13674 534 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 XRCC1P18887 633 aaPredicted RBP15.26■□□□□ 0.03
SPIDR-201ENST00000297423 POLR2BP30876 1174 aaKnown RBP15.26■□□□□ 0.03
SPIDR-201ENST00000297423 OAZ1P54368 228 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 OGDHQ02218 1023 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 PRPSAP1Q14558 356 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 GPR107Q5VW38 600 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 OGFOD2Q6N063 350 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 IL31RAQ8NI17 732 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 CIB1Q99828 191 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 DDX43Q9NXZ2 648 aaKnown RBP15.26■□□□□ 0.03
SPIDR-201ENST00000297423 ZNF510Q9Y2H8 683 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 RBL1P28749 1068 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 SLC5A2P31639 672 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 C21orf59P57076 290 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 PERM1Q5SV97 790 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 SLC9A9Q8IVB4 645 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 SLC10A4Q96EP9 437 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 PRICKLE1Q96MT3 831 aaPredicted RBP15.26■□□□□ 0.03
SPIDR-201ENST00000297423 PDCD2LQ9BRP1 358 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 RIPK3Q9Y572 518 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 DNAJA2O60884 412 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 ITGAXP20702 1163 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 MAP4P27816 1152 aaKnown RBP15.26■□□□□ 0.03
SPIDR-201ENST00000297423 RGS7P49802 495 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 PGM5Q15124 567 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 UGCGQ16739 394 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 SWSAP1Q6NVH7 229 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 RNF111Q6ZNA4 994 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 NCCRP1Q6ZVX7 275 aaPredicted RBP15.26■□□□□ 0.03
SPIDR-201ENST00000297423 CMC1Q7Z7K0 106 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 IFNEQ86WN2 208 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 GAB3Q8WWW8 586 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 ZNF512Q96ME7 567 aaPredicted RBP15.26■□□□□ 0.03
SPIDR-201ENST00000297423 ADPGKQ9BRR6 497 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 NRDE2Q9H7Z3 1164 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 PXMP2Q9NR77 195 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 RBM47A0AV96 593 aaKnown RBP15.26■□□□□ 0.03
SPIDR-201ENST00000297423 GOLGA8TH3BQL2 631 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 K7ERI5 159 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 CDKN2BP42772 138 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 RAP1GAPP47736 663 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 PIGHQ14442 188 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms