RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 MICALCLQ6ZW33 695 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 CPLX4Q7Z7G2 160 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 VPS52Q8N1B4 723 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 PYROXD2Q8N2H3 581 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 FBXO36Q8NEA4 188 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 RNF139Q8WU17 664 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 CHMP6Q96FZ7 201 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 SPATA17Q96L03 361 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 CEP295NLQ96MC4 621 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 PPP1R12CQ9BZL4 782 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 HCSTQ9UBK5 93 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 PRG3Q9Y2Y8 225 aaPredicted RBP9.45□□□□□ -0.9
PDPN-201ENST00000294489 TMEM120BA0PK00 339 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 RASA4BC9J798 803 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 H7C4K7 107 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 I6L893 689 aaPredicted RBP9.45□□□□□ -0.9
PDPN-201ENST00000294489 RASA4O43374 803 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 ADRA1BP35368 520 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 SLC5A3P53794 718 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 GAD2Q05329 585 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 GPR17Q13304 367 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 KLHL38Q2WGJ6 581 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 MSS51Q4VC12 460 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 BSPRYQ5W0U4 402 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 ZNF280DQ6N043 979 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 KCNT2Q6UVM3 1135 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 SCD5Q86SK9 330 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 SRRM1Q8IYB3 904 aaKnown RBP9.45□□□□□ -0.9
PDPN-201ENST00000294489 TFB1MQ8WVM0 346 aaKnown RBP9.45□□□□□ -0.9
PDPN-201ENST00000294489 ATXN2LQ8WWM7 1075 aaKnown RBP9.45□□□□□ -0.9
PDPN-201ENST00000294489 TOP1MTQ969P6 601 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 OLFM3Q96PB7 478 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 QKIQ96PU8 341 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDPN-201ENST00000294489 ANLNQ9NQW6 1124 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 ARHGEF4Q9NR80 690 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 ETNK2Q9NVF9 386 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 DTLQ9NZJ0 730 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 SENP1Q9P0U3 644 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 FETUBQ9UGM5 382 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 ZMYND8Q9ULU4 1186 aaPredicted RBP9.45□□□□□ -0.9
PDPN-201ENST00000294489 PCDHB5Q9Y5E4 795 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 CEP350Q5VT06 3117 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 CREB3O43889 395 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 BANF1O75531 89 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 GCATO75600 419 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 OR4Q2P0C623 313 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 GEMIN4P57678 1058 aaKnown RBP9.44□□□□□ -0.9
PDPN-201ENST00000294489 SLC10A2Q12908 348 aaPredicted RBP9.44□□□□□ -0.9
PDPN-201ENST00000294489 RASA2Q15283 850 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 CTXN3Q4LDR2 81 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 FAM171A1Q5VUB5 890 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 TMEM173Q86WV6 379 aaPredicted RBP9.44□□□□□ -0.9
PDPN-201ENST00000294489 CYP4X1Q8N118 509 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 PRMT1Q99873 361 aaKnown RBP9.44□□□□□ -0.9
PDPN-201ENST00000294489 VN1R3Q9BXE9 311 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 MAGEB5Q9BZ81 275 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 TMEM39AQ9NV64 488 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 ARHGEF38Q9NXL2 777 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 EURLQ9NYK6 297 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 NKIRAS1Q9NYS0 192 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 PSMC3IPQ9P2W1 217 aaPredicted RBP9.44□□□□□ -0.9
PDPN-201ENST00000294489 BACE2Q9Y5Z0 518 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 TRIM43BA6NCK2 446 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 C5orf60A6NFR6 353 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 EEF2KO00418 725 aaKnown RBP9.44□□□□□ -0.9
PDPN-201ENST00000294489 SPAG6O75602 509 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 STK10O94804 968 aaKnown RBP9.44□□□□□ -0.9
PDPN-201ENST00000294489 APRTP07741 180 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 KRT15P19012 456 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 ITGB8P26012 769 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 SSTR1P30872 391 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 MAGEA6P43360 314 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 GPX6P59796 221 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 PAFAH1B3Q15102 231 aaKnown RBP9.44□□□□□ -0.9
PDPN-201ENST00000294489 MSANTD2Q6P1R3 559 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 RSPO2Q6UXX9 243 aaPredicted RBP9.44□□□□□ -0.9
PDPN-201ENST00000294489 ARHGEF18Q6ZSZ5 1173 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 ANKS3Q6ZW76 656 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 PDZD4Q76G19 769 aaPredicted RBP9.44□□□□□ -0.9
PDPN-201ENST00000294489 UBE2Q1Q7Z7E8 422 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 SCAMP5Q8TAC9 235 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 CCDC110Q8TBZ0 833 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 MAML1Q92585 1016 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 TRIM43Q96BQ3 446 aaPredicted RBP9.44□□□□□ -0.9
PDPN-201ENST00000294489 SMOC2Q9H3U7 446 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 CCDC134Q9H6E4 229 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 ABCC13Q9NSE7 274 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 DDIT4Q9NX09 232 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 ATP11BQ9Y2G3 1177 aa9.44□□□□□ -0.9
PDPN-201ENST00000294489 CLUHO75153 1309 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 EFCAB14O75071 495 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 ZNF189O75820 626 aaPredicted RBP9.43□□□□□ -0.9
PDPN-201ENST00000294489 C1QTNF8P60827 252 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 YWHAGP61981 247 aaKnown RBP eCLIP9.43□□□□□ -0.9
PDPN-201ENST00000294489 PDK1Q15118 436 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 RTP2Q5QGT7 225 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 GKAP1Q5VSY0 366 aaPredicted RBP9.43□□□□□ -0.9
PDPN-201ENST00000294489 SLC8B1Q6J4K2 584 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 TAS1R1Q7RTX1 841 aa9.43□□□□□ -0.9
PDPN-201ENST00000294489 DEFB128Q7Z7B8 93 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms