RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 THADAQ6YHU6 1953 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 E5RJQ4 531 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 CDX4O14627 284 aaPredicted RBP10.88□□□□□ -0.67
SNF8-201ENST00000290330 IRAK2O43187 625 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 ACSL4O60488 711 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 PRKCHP24723 683 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 ERCC5P28715 1186 aaPredicted RBP10.88□□□□□ -0.67
SNF8-201ENST00000290330 USP8P40818 1118 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 DPP6P42658 865 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 MTIF2P46199 727 aaKnown RBP10.88□□□□□ -0.67
SNF8-201ENST00000290330 SGSHP51688 502 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 ZNF33AQ06730 810 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 NNTQ13423 1086 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 E2F5Q15329 346 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 MAN2A1Q16706 1144 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 TPD52L1Q16890 204 aaPredicted RBP10.88□□□□□ -0.67
SNF8-201ENST00000290330 TRIM61Q5EBN2 209 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 PEAR1Q5VY43 1037 aaPredicted RBP10.88□□□□□ -0.67
SNF8-201ENST00000290330 NADSYN1Q6IA69 706 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 KIAA1324Q6UXG2 1013 aaKnown RBP10.88□□□□□ -0.67
SNF8-201ENST00000290330 KIAA0907Q7Z7F0 614 aaPredicted RBP10.88□□□□□ -0.67
SNF8-201ENST00000290330 METTL3Q86U44 580 aaKnown RBP10.88□□□□□ -0.67
SNF8-201ENST00000290330 ADIPOR2Q86V24 386 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 GAS2L3Q86XJ1 694 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 SLC41A1Q8IVJ1 513 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 WDTC1Q8N5D0 677 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.88□□□□□ -0.67
SNF8-201ENST00000290330 SLC39A13Q96H72 371 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 SERPINB11Q96P15 392 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 PRDM16Q9HAZ2 1276 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 SIX2Q9NPC8 291 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 ABCB8Q9NUT2 735 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 TLR6Q9Y2C9 796 aa10.88□□□□□ -0.67
SNF8-201ENST00000290330 ATXN2Q99700 1313 aaKnown RBP10.87□□□□□ -0.67
SNF8-201ENST00000290330 CAPN9O14815 690 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 SYNCRIPO60506 623 aaKnown RBP10.87□□□□□ -0.67
SNF8-201ENST00000290330 TBL1XO60907 577 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 EPHX1P07099 455 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 PABPC1P11940 636 aaKnown RBP10.87□□□□□ -0.67
SNF8-201ENST00000290330 HOXD12P35452 270 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 COPAP53621 1224 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 YWHAZP63104 245 aaKnown RBP10.87□□□□□ -0.67
SNF8-201ENST00000290330 ARID5AQ03989 594 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 CCDC173Q0VFZ6 552 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 LMAN2Q12907 356 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 PDCLQ13371 301 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 DAB2IPQ5VWQ8 1189 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 SMYD5Q6GMV2 418 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 SLC23A3Q6PIS1 610 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 SERPINA13PQ6UXR4 307 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 CHST9Q7L1S5 443 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 TAC4Q86UU9 113 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 TMPRSS6Q8IU80 811 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 FAM114A1Q8IWE2 563 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 AHI1Q8N157 1196 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 ADAM32Q8TC27 787 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 WFDC5Q8TCV5 224 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 WFIKKN2Q8TEU8 576 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 MYEOVQ96EZ4 313 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 ZNF419Q96HQ0 510 aaPredicted RBP10.87□□□□□ -0.67
SNF8-201ENST00000290330 PRICKLE1Q96MT3 831 aaPredicted RBP10.87□□□□□ -0.67
SNF8-201ENST00000290330 TRIM62Q9BVG3 475 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 NUSAP1Q9BXS6 441 aaKnown RBP10.87□□□□□ -0.67
SNF8-201ENST00000290330 TMEM245Q9H330 911 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 NDST4Q9H3R1 872 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 POPDC2Q9HBU9 364 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 TMEM9BQ9NQ34 198 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 ITM2CQ9NQX7 267 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 USP36Q9P275 1121 aaKnown RBP10.87□□□□□ -0.67
SNF8-201ENST00000290330 TJP2Q9UDY2 1190 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 GGA2Q9UJY4 613 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 DNAJC12Q9UKB3 198 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 AJAP1Q9UKB5 411 aaPredicted RBP10.87□□□□□ -0.67
SNF8-201ENST00000290330 PCDHGC3Q9UN70 934 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 NUP205Q92621 2012 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 NCOR2Q9Y618 2525 aa10.87□□□□□ -0.67
SNF8-201ENST00000290330 PLXND1Q9Y4D7 1925 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 SPTBN2O15020 2390 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 FOXN3O00409 490 aaPredicted RBP10.86□□□□□ -0.67
SNF8-201ENST00000290330 NDUFS2O75306 463 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 KCNK5O95279 499 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 TRUB2O95900 331 aaKnown RBP10.86□□□□□ -0.67
SNF8-201ENST00000290330 IGLV3-25P01717 112 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 HLA-EP13747 358 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 ENGP17813 658 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 CD6P30203 668 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 CD70P32970 193 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 RPS24P62847 133 aaKnown RBP10.86□□□□□ -0.67
SNF8-201ENST00000290330 PTK2Q05397 1052 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 EIF4EBP2Q13542 120 aaPredicted RBP10.86□□□□□ -0.67
SNF8-201ENST00000290330 TAF5Q15542 800 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 PTPRNQ16849 979 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 DUOXA1Q1HG43 343 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 VWA3BQ502W6 1294 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 HSP90AA4PQ58FG1 418 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 MIIPQ5JXC2 388 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 MBLAC2Q68D91 279 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 DPY19L2P1Q6NXN4 242 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 SASS6Q6UVJ0 657 aa10.86□□□□□ -0.67
SNF8-201ENST00000290330 RBM43Q6ZSC3 357 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms