RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ZBTB49Q6ZSB9 765 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 PCYOX1LQ8NBM8 494 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 PYDC1Q8WXC3 89 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 IL1RL2Q9HB29 575 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 SPG21Q9NZD8 308 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 V9GYQ6 96 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 SNED1Q8TER0 1413 aa11.68□□□□□ -0.54
NPC1L1-201ENST00000289547 TOGARAM1Q9Y4F4 1720 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 TMEM150BA6NC51 233 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 LRRC10BA6NIK2 292 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 TREHO43280 583 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 FBXO21O94952 628 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 IRF1P10914 325 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 MYL4P12829 197 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 SERPINB5P36952 375 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 SLC11A2P49281 568 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 KPNA1P52294 538 aaPredicted RBP11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 MTA1Q13330 715 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 TCHHL1Q5QJ38 904 aaPredicted RBP11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 CCDC81Q6ZN84 652 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 SPON2Q9BUD6 331 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 NIFKQ9BYG3 293 aaKnown RBP11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 SIK2Q9H0K1 926 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 NOL6Q9H6R4 1146 aaKnown RBP11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 HNRNPCL2B2RXH8 293 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 MFN2O95140 757 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 RBP3P10745 1247 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 THRAP10827 490 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 PON1P27169 355 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 FUT2Q10981 343 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 CENPPQ6IPU0 288 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 CDKL3Q8IVW4 592 aaPredicted RBP11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 ZCCHC7Q8N3Z6 543 aaKnown RBP11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 ATP6V0D2Q8N8Y2 350 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 ARHGEF26Q96DR7 871 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 RMND5BQ96G75 393 aaPredicted RBP11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 FAM105AQ9NUU6 356 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 SLC12A3P55017 1021 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 ACAP1Q15027 740 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 GSTA3Q16772 222 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 TMEM139Q8IV31 216 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 PPIL6Q8IXY8 311 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 POU5F2Q8N7G0 328 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 PAFAH2Q99487 392 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 SYT15Q9BQS2 421 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 DDX43Q9NXZ2 648 aaKnown RBP11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 TMCO1Q9UM00 188 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 CDYLQ9Y232 598 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 DNAJC16Q9Y2G8 782 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 R3HDM2Q9Y2K5 976 aaKnown RBP11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 AP3B1O00203 1094 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 NDUFV1P49821 464 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 MAP3K10Q02779 954 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 USP4Q13107 963 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 MAPK11Q15759 364 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 C1orf186Q6ZWK4 172 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 OXNAD1Q96HP4 312 aaPredicted RBP11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 FBXO44Q9H4M3 255 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 CACYBPQ9HB71 228 aaKnown RBP11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 NMRK1Q9NWW6 199 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 COL20A1Q9P218 1284 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 GTF3C4Q9UKN8 822 aa11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 MAFBQ9Y5Q3 323 aaPredicted RBP11.67□□□□□ -0.54
NPC1L1-201ENST00000289547 CST8O60676 142 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 VAV1P15498 845 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 RGS7P49802 495 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 BCAT1P54687 386 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 CAPSQ13938 189 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 EPC2Q52LR7 807 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 LACTB2Q53H82 288 aaPredicted RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 SLC45A4Q5BKX6 768 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 ZNF75CPQ92670 426 aaPredicted RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 RRN3Q9NYV6 651 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 LINC00854A0A1B0GVQ3 168 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 MEI4A8MW99 385 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 LACTBL1A8MY62 500 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 ATP9BO43861 1147 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 RTN3O95197 1032 aaPredicted RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 RPL5P46777 297 aaKnown RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 CHN2P52757 468 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 RSBN1Q5VWQ0 802 aaPredicted RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 CST9Q5W186 159 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 KIAA0319LQ8IZA0 1049 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 SIX5Q8N196 739 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 EXOSC4Q9NPD3 245 aaKnown RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 FBXL21Q9UKT6 434 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 PADI3Q9ULW8 664 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 CHD4Q14839 1912 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 A0A1W2PQ45 241 aaPredicted RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 A0A1W2PQY0 241 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 RASSF9O75901 435 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 USP1O94782 785 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 HMBSP08397 361 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 GALK1P51570 392 aa11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 PDAP1Q13442 181 aaKnown RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 PABPC1LQ4VXU2 614 aaKnown RBP11.66□□□□□ -0.54
NPC1L1-201ENST00000289547 RNF43Q68DV7 783 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms