RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 PIDD1Q9HB75 910 aa11.77□□□□□ -0.53
XRCC4-201ENST00000282268 ARHGEF4Q9NR80 690 aa11.77□□□□□ -0.53
XRCC4-201ENST00000282268 STIM2Q9P246 746 aa11.77□□□□□ -0.53
XRCC4-201ENST00000282268 DNMT3BQ9UBC3 853 aaKnown RBP11.77□□□□□ -0.53
XRCC4-201ENST00000282268 DMGDHQ9UI17 866 aaKnown RBP11.77□□□□□ -0.53
XRCC4-201ENST00000282268 GREB1Q4ZG55 1949 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 LAMA2P24043 3122 aaKnown RBP11.76□□□□□ -0.53
XRCC4-201ENST00000282268 XYLBO75191 536 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 LRIG2O94898 1065 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 PTPN2P17706 415 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 ERCC2P18074 760 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 HDCP19113 662 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 EPHB2P29323 1055 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 CCR2P41597 374 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 PPP3CCP48454 512 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 VPS41P49754 854 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 GBE1Q04446 702 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 PPP1R7Q15435 360 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 CCNG2Q16589 344 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 CYP1B1Q16678 543 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 PIK3R6Q5UE93 754 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 NCBP2-AS2Q69YL0 99 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 DARS2Q6PI48 645 aaKnown RBP11.76□□□□□ -0.53
XRCC4-201ENST00000282268 PDZD4Q76G19 769 aaPredicted RBP11.76□□□□□ -0.53
XRCC4-201ENST00000282268 MAATS1Q7Z4T9 603 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 GRASPQ7Z6J2 395 aaPredicted RBP11.76□□□□□ -0.53
XRCC4-201ENST00000282268 C12orf50Q8NA57 414 aaPredicted RBP11.76□□□□□ -0.53
XRCC4-201ENST00000282268 FAM71BQ8TC56 605 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 IFT81Q8WYA0 676 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 WBP2Q969T9 261 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 FAF2Q96CS3 445 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 HAPLN3Q96S86 360 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 LMAN2LQ9H0V9 348 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 SMG9Q9H0W8 520 aaKnown RBP11.76□□□□□ -0.53
XRCC4-201ENST00000282268 OSBPL2Q9H1P3 480 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 DPH5Q9H2P9 285 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 LRRC19Q9H756 370 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 EPB41L5Q9HCM4 733 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 VANGL2Q9ULK5 521 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 EFR3BQ9Y2G0 817 aa11.76□□□□□ -0.53
XRCC4-201ENST00000282268 HBS1LQ9Y450 684 aaKnown RBP11.76□□□□□ -0.53
XRCC4-201ENST00000282268 E9PAM4 449 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 APOC4-APOC2K7ER74 178 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 TRDMT1O14717 391 aaKnown RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 MFSD11O43934 449 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 ECEL1O95672 775 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 OAS1P00973 400 aaKnown RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 APOC2P02655 101 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 CKMP06732 381 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 RHOP08100 348 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 CDC25CP30307 473 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 CORO1AP31146 461 aaKnown RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 PTGIRP43119 386 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 FNTAP49354 379 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 TUBP50607 506 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 KPNA1P52294 538 aaPredicted RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 TUBB4BP68371 445 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 BYSLQ13895 437 aaKnown RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 DPYSQ14117 519 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 TEAD2Q15562 447 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 DUSP6Q16828 381 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 GLE1Q53GS7 698 aaKnown RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 MS4A13Q5J8X5 152 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 GPR158Q5T848 1215 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 SLC9A4Q6AI14 798 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 TMC5Q6UXY8 1006 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 CHSY1Q86X52 802 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 DDX42Q86XP3 938 aaKnown RBP eCLIP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 JAMLQ86YT9 394 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 DENND1CQ8IV53 801 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 GSPT2Q8IYD1 628 aaKnown RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 TAB3Q8N5C8 712 aaPredicted RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 TTC13Q8NBP0 860 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 SHKBP1Q8TBC3 707 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 ING5Q8WYH8 240 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 BTN2A3PQ96KV6 586 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 TMEM121Q9BTD3 319 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 KLF16Q9BXK1 252 aaPredicted RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 HOMER3Q9NSC5 361 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 MPP6Q9NZW5 540 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 CPQQ9Y646 472 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 COL4A4P53420 1690 aaPredicted RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 ZNF638Q14966 1978 aaKnown RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 SGK1O00141 431 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 MCF2LO15068 1137 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 TSPAN3O60637 253 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 IFNB1P01574 187 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 ZSCAN5DPP0CG00 497 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 ETS1P14921 441 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 ZFXP17010 805 aaPredicted RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 TGM2P21980 687 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 HARS2P49590 506 aaKnown RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 VCPP55072 806 aaKnown RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 VSNL1P62760 191 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 COG7P83436 770 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 SMAD3P84022 425 aaKnown RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 SLC10A2Q12908 348 aaPredicted RBP11.75□□□□□ -0.53
XRCC4-201ENST00000282268 SEMA3BQ13214 749 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 NNTQ13423 1086 aa11.75□□□□□ -0.53
XRCC4-201ENST00000282268 AUHQ13825 339 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms