RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 CHADO15335 359 aa22.78■■□□□ 1.24
CCDC7-201ENST00000277657 MSI1O43347 362 aaKnown RBP22.78■■□□□ 1.24
CCDC7-201ENST00000277657 LRIG2O94898 1065 aa22.78■■□□□ 1.24
CCDC7-201ENST00000277657 SOD2P04179 222 aa22.78■■□□□ 1.24
CCDC7-201ENST00000277657 BASP1P80723 227 aaKnown RBP22.78■■□□□ 1.24
CCDC7-201ENST00000277657 PDK1Q15118 436 aa22.78■■□□□ 1.24
CCDC7-201ENST00000277657 HIF1AQ16665 826 aa22.78■■□□□ 1.24
CCDC7-201ENST00000277657 HEATR6Q6AI08 1181 aaKnown RBP22.78■■□□□ 1.24
CCDC7-201ENST00000277657 CENPUQ71F23 418 aa22.78■■□□□ 1.24
CCDC7-201ENST00000277657 CROCCP2Q86T23 111 aa22.78■■□□□ 1.24
CCDC7-201ENST00000277657 SH2D3CQ8N5H7 860 aa22.78■■□□□ 1.24
CCDC7-201ENST00000277657 FBXO32Q969P5 355 aa22.78■■□□□ 1.24
CCDC7-201ENST00000277657 EXOC4Q96A65 974 aa22.78■■□□□ 1.24
CCDC7-201ENST00000277657 CEP295NLQ96MC4 621 aa22.78■■□□□ 1.24
CCDC7-201ENST00000277657 SNX10Q9Y5X0 201 aa22.78■■□□□ 1.24
CCDC7-201ENST00000277657 BAIAP3O94812 1187 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 OR1D2P34982 312 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 MAGEA6P43360 314 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 PSEN1P49768 467 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 GAD2Q05329 585 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 FAM117BQ6P1L5 589 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 PDZD4Q76G19 769 aaPredicted RBP22.77■■□□□ 1.24
CCDC7-201ENST00000277657 TAB3Q8N5C8 712 aaPredicted RBP22.77■■□□□ 1.24
CCDC7-201ENST00000277657 CCDC33Q8N5R6 958 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 UHMK1Q8TAS1 419 aaKnown RBP22.77■■□□□ 1.24
CCDC7-201ENST00000277657 HTR3CQ8WXA8 447 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 C9orf72Q96LT7 481 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 LGMNQ99538 433 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 TMEM106CQ9BVX2 250 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 RAB6BQ9NRW1 208 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 NUDT5Q9UKK9 219 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 KCNU1A8MYU2 1149 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 E7ESA3 106 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 EIF3HO15372 352 aaKnown RBP eCLIP22.77■■□□□ 1.24
CCDC7-201ENST00000277657 VAV1P15498 845 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 GLUD2P49448 558 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 CBLBQ13191 982 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 BTG3Q14201 252 aaPredicted RBP22.77■■□□□ 1.24
CCDC7-201ENST00000277657 SPOUT1Q5T280 376 aaKnown RBP22.77■■□□□ 1.24
CCDC7-201ENST00000277657 EMC10Q5UCC4 262 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 CCDC110Q8TBZ0 833 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 PGM2Q96G03 612 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 TTC25Q96NG3 672 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 CLSTN3Q9BQT9 956 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 ROPN1BQ9BZX4 212 aaPredicted RBP22.77■■□□□ 1.24
CCDC7-201ENST00000277657 CENPHQ9H3R5 247 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 ROPN1Q9HAT0 212 aaPredicted RBP22.77■■□□□ 1.24
CCDC7-201ENST00000277657 XPO7Q9UIA9 1087 aaKnown RBP22.77■■□□□ 1.24
CCDC7-201ENST00000277657 NEU3Q9UQ49 428 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 TLR6Q9Y2C9 796 aa22.77■■□□□ 1.24
CCDC7-201ENST00000277657 MRPL42Q9Y6G3 142 aaKnown RBP22.77■■□□□ 1.24
CCDC7-201ENST00000277657 GOLGA8MH3BSY2 632 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 PPP1R12AO14974 1030 aaPredicted RBP22.76■■□□□ 1.23
CCDC7-201ENST00000277657 PAGE1O75459 146 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 ABHD2P08910 425 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 ACRP10323 421 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 RPL17P18621 184 aaKnown RBP22.76■■□□□ 1.23
CCDC7-201ENST00000277657 LAG3P18627 525 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 ATF6P18850 670 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 HTR7P34969 479 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 ARL4CP56559 192 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 DSG1Q02413 1049 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 TAF10Q12962 218 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 ARTNQ5T4W7 220 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 KIAA1841Q6NSI8 718 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 SLC39A13Q96H72 371 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 TMEM169Q96HH4 297 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 TTLL2Q9BWV7 592 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 PRDM12Q9H4Q4 367 aa22.76■■□□□ 1.23
CCDC7-201ENST00000277657 TLR8Q9NR97 1041 aaKnown RBP22.76■■□□□ 1.23
CCDC7-201ENST00000277657 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.76■■□□□ 1.23
CCDC7-201ENST00000277657 CARNS1A5YM72 827 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 TCEA3O75764 348 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 ZDHHC11BP0C7U3 371 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 EPHB2P29323 1055 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 HOXC13P31276 330 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 FASTKD3Q14CZ7 662 aaKnown RBP22.75■■□□□ 1.23
CCDC7-201ENST00000277657 FNBP1LQ5T0N5 605 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 C6orf118Q5T5N4 469 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 MANEALQ5VSG8 457 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 COLGALT1Q8NBJ5 622 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 HERC2P3Q9BVR0 1158 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 KLC2Q9H0B6 622 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 NCAM2O15394 837 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 ZNF189O75820 626 aaPredicted RBP22.75■■□□□ 1.23
CCDC7-201ENST00000277657 PDIA2Q13087 525 aaKnown RBP22.75■■□□□ 1.23
CCDC7-201ENST00000277657 FAM182AQ5T1J6 154 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 RASIP1Q5U651 963 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 NPWQ8N729 165 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 TLCD1Q96CP7 247 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 IL23AQ9NPF7 189 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 OLA1Q9NTK5 396 aaKnown RBP22.75■■□□□ 1.23
CCDC7-201ENST00000277657 PSD3Q9NYI0 1048 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 HSFX1Q9UBD0 423 aa22.75■■□□□ 1.23
CCDC7-201ENST00000277657 AFF4Q9UHB7 1163 aaKnown RBP22.75■■□□□ 1.23
CCDC7-201ENST00000277657 PTPRSQ13332 1948 aa22.74■■□□□ 1.23
CCDC7-201ENST00000277657 A0A0A0MRY4 1105 aa22.74■■□□□ 1.23
CCDC7-201ENST00000277657 SLC38A8A6NNN8 435 aa22.74■■□□□ 1.23
CCDC7-201ENST00000277657 ABLIM3O94929 683 aa22.74■■□□□ 1.23
CCDC7-201ENST00000277657 TUFMP49411 452 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms