RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 NUMBLQ9Y6R0 609 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 TRIP12Q14669 1992 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-201ENST00000277198 PIAS1O75925 651 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 SMNDC1O75940 238 aaKnown RBP eCLIP13.33□□□□□ -0.28
C9orf3-201ENST00000277198 PFKMP08237 780 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 MYL2P10916 166 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 ESRRAP11474 423 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-201ENST00000277198 RBL1P28749 1068 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 CRHR1P34998 444 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 CLCN3P51790 818 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 SLC6A3Q01959 620 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 ORC1Q13415 861 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 GPNMBQ14956 572 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 PKDCCQ504Y2 493 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 C1orf228Q6PIY5 440 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 OLFML1Q6UWY5 402 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 OTOP2Q7RTS6 562 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 CTAGE3PQ8IX95 158 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 VPS52Q8N1B4 723 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 TMEM199Q8N511 208 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 TAB3Q8N5C8 712 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-201ENST00000277198 LINC01465Q8N7H1 131 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 PCDH19Q8TAB3 1148 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 MCUR1Q96AQ8 359 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 WWP1Q9H0M0 922 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 SETD4Q9NVD3 440 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 DERAQ9Y315 318 aa13.33□□□□□ -0.28
C9orf3-201ENST00000277198 FAM159BA6NKW6 160 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 GRXCR1A8MXD5 290 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 F8W8V4 182 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 TREHO43280 583 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 MAGEC1O60732 1142 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 ENTPD5O75356 428 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 RFPL1O75677 317 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 PTPN9P43378 593 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 RAP1GDS1P52306 607 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 MRPS35P82673 323 aaKnown RBP13.32□□□□□ -0.28
C9orf3-201ENST00000277198 SARNPP82979 210 aaKnown RBP13.32□□□□□ -0.28
C9orf3-201ENST00000277198 ZRSR2Q15696 482 aaKnown RBP13.32□□□□□ -0.28
C9orf3-201ENST00000277198 DPYSL2Q16555 572 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 TRIM71Q2Q1W2 868 aaKnown RBP13.32□□□□□ -0.28
C9orf3-201ENST00000277198 C15orf59Q2T9L4 293 aaPredicted RBP13.32□□□□□ -0.28
C9orf3-201ENST00000277198 SH3PXD2AQ5TCZ1 1133 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 PRPF39Q86UA1 669 aaKnown RBP13.32□□□□□ -0.28
C9orf3-201ENST00000277198 CDR2LQ86X02 465 aaPredicted RBP13.32□□□□□ -0.28
C9orf3-201ENST00000277198 TMPRSS6Q8IU80 811 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 TET1Q8NFU7 2136 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 E2F7Q96AV8 911 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 CFAP36Q96G28 342 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 ACAP3Q96P50 834 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 EBNA1BP2Q99848 306 aaKnown RBP13.32□□□□□ -0.28
C9orf3-201ENST00000277198 KATNAL1Q9BW62 490 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 C12orf65Q9H3J6 166 aaKnown RBP13.32□□□□□ -0.28
C9orf3-201ENST00000277198 DPP3Q9NY33 737 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 TAS2R1Q9NYW7 299 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 PRUNE2Q8WUY3 3088 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 COL1A2P08123 1366 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 FCHO1O14526 889 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 AVILO75366 819 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 APRTP07741 180 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 MLNP12872 115 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 CYP3A5P20815 502 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 VHLP40337 213 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 NRLP54845 237 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 OCRLQ01968 901 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 PPIGQ13427 754 aaKnown RBP eCLIP13.32□□□□□ -0.28
C9orf3-201ENST00000277198 TCTN1Q2MV58 587 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 CCNJLQ8IV13 435 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 HACE1Q8IYU2 909 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 ACMSDQ8TDX5 336 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 FAM172AQ8WUF8 416 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 SLC35F5Q8WV83 523 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 TRAPPC12Q8WVT3 735 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 DNAJC9Q8WXX5 260 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 SNRNP25Q9BV90 132 aaKnown RBP13.32□□□□□ -0.28
C9orf3-201ENST00000277198 SEZ6LQ9BYH1 1024 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 NRDE2Q9H7Z3 1164 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 PLEKHA5Q9HAU0 1116 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 ALG13Q9NP73 1137 aaKnown RBP13.32□□□□□ -0.28
C9orf3-201ENST00000277198 IL23AQ9NPF7 189 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 HEY1Q9Y5J3 304 aa13.32□□□□□ -0.28
C9orf3-201ENST00000277198 A6NHS1 94 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 CAPN14A8MX76 684 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 HOXC8P31273 242 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 MRPS5P82675 430 aaKnown RBP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 TMPRSS15P98073 1019 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 MTM1Q13496 603 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 GOLGA7BQ2TAP0 167 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 KHDC1Q4VXA5 237 aaKnown RBP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 SCYL2Q6P3W7 929 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 TRAF7Q6Q0C0 670 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 KYAT3Q6YP21 454 aaKnown RBP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 UNC5AQ6ZN44 842 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 CDHR3Q6ZTQ4 885 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 UNC93AQ86WB7 457 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 CRLF3Q8IUI8 442 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 CENPIQ92674 756 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 SIGLEC10Q96LC7 697 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 FAM161BQ96MY7 647 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 STN1Q9H668 368 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms