RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 KLHL38Q2WGJ6 581 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 VARS2Q5ST30 1063 aaKnown RBP9.89□□□□□ -0.83
TRIM55-201ENST00000276573 BTBD8Q5XKL5 378 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 ADGRD1Q6QNK2 874 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 SCD5Q86SK9 330 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 SCN4BQ8IWT1 228 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 TP53INP2Q8IXH6 220 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 ABI1Q8IZP0 508 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 COLGALT1Q8NBJ5 622 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 CCNYQ8ND76 341 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 LRRC39Q96DD0 335 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 FUBP3Q96I24 572 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRIM55-201ENST00000276573 ZNF317Q96PQ6 595 aaPredicted RBP9.89□□□□□ -0.83
TRIM55-201ENST00000276573 PRMT1Q99873 361 aaKnown RBP9.89□□□□□ -0.83
TRIM55-201ENST00000276573 FERMT1Q9BQL6 677 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 DHRS4Q9BTZ2 278 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 ABI2Q9NYB9 513 aaPredicted RBP9.89□□□□□ -0.83
TRIM55-201ENST00000276573 PSMC3IPQ9P2W1 217 aaPredicted RBP9.89□□□□□ -0.83
TRIM55-201ENST00000276573 ADAM28Q9UKQ2 775 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 SNX10Q9Y5X0 201 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 DNAH12Q6ZR08 3092 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 COL4A4P53420 1690 aaPredicted RBP9.89□□□□□ -0.83
TRIM55-201ENST00000276573 NLRC5Q86WI3 1866 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 SPAG6O75602 509 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 STK10O94804 968 aaKnown RBP9.88□□□□□ -0.83
TRIM55-201ENST00000276573 PGFP49763 221 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 GATMP50440 423 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 FAM171A1Q5VUB5 890 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 APBB2Q92870 758 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 RNF34Q969K3 372 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 MRRFQ96E11 262 aaKnown RBP9.88□□□□□ -0.83
TRIM55-201ENST00000276573 CHMP6Q96FZ7 201 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 SIGLEC10Q96LC7 697 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 C8orf48Q96LL4 319 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 DEFB118Q96PH6 123 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 CYTH2Q99418 400 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 GPR62Q9BZJ7 368 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 FAM107BQ9H098 131 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 TRABDQ9H4I3 376 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 PAK6Q9NQU5 681 aaPredicted RBP9.88□□□□□ -0.83
TRIM55-201ENST00000276573 ARHGEF38Q9NXL2 777 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 SENP1Q9P0U3 644 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 LRFN2Q9ULH4 789 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 RNF103O00237 685 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 NCAM2O15394 837 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 IRAK2O43187 625 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 OPHN1O60890 802 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 ZNF189O75820 626 aaPredicted RBP9.88□□□□□ -0.83
TRIM55-201ENST00000276573 KRT15P19012 456 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 PTPRDP23468 1912 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 CYP2C18P33260 490 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 MSH2P43246 934 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 MAGEA3P43357 314 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 SARNPP82979 210 aaKnown RBP9.88□□□□□ -0.83
TRIM55-201ENST00000276573 CDK16Q00536 496 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 WASHC5Q12768 1159 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 IFRD2Q12894 506 aaPredicted RBP9.88□□□□□ -0.83
TRIM55-201ENST00000276573 EFTUD2Q15029 972 aaKnown RBP eCLIP9.88□□□□□ -0.83
TRIM55-201ENST00000276573 QPCTQ16769 361 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 PARP6Q2NL67 630 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 CTXN3Q4LDR2 81 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 BRMS1LQ5PSV4 323 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 ZNF534Q76KX8 674 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 CPLX4Q7Z7G2 160 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 MON1AQ86VX9 555 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 CEP57Q86XR8 500 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 NUP93Q8N1F7 819 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 CRIPAKQ8N1N5 446 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 ANKRD42Q8N9B4 389 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 DCAKDQ8WVC6 231 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 HAPLN3Q96S86 360 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 PAFAH2Q99487 392 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 EPAS1Q99814 870 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 BRD8Q9H0E9 1235 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 OGDHLQ9ULD0 1010 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 SCML2Q9UQR0 700 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 PCDHB5Q9Y5E4 795 aa9.88□□□□□ -0.83
TRIM55-201ENST00000276573 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.87□□□□□ -0.83
TRIM55-201ENST00000276573 A0A1W2PPM1 405 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 TCRBV9S1A1TA0A576 114 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 OR6C75A6NL08 312 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 TRDMT1O14717 391 aaKnown RBP9.87□□□□□ -0.83
TRIM55-201ENST00000276573 PIAS1O75925 651 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 LRIG2O94898 1065 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 MYCP01106 439 aaPredicted RBP9.87□□□□□ -0.83
TRIM55-201ENST00000276573 GSTA2P09210 222 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 FGFR3P22607 806 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 EPHB2P29323 1055 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 MAGEA11P43364 429 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 IFNAR2P48551 515 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 SLC11A1P49279 550 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 SLC18A1P54219 525 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 LRRC14Q15048 493 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 MTFR1Q15390 333 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 DDR2Q16832 855 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 SDHAF4Q5VUM1 108 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 DENND5BQ6ZUT9 1274 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 PID1Q7Z2X4 250 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 NPAS4Q8IUM7 802 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 ZNF567Q8N184 647 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms