RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 CCDC26Q8TAB7 109 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 CACTINQ8WUQ7 758 aaKnown RBP10.37□□□□□ -0.75
LRTM1-201ENST00000273286 MRPS31Q92665 395 aaKnown RBP10.37□□□□□ -0.75
LRTM1-201ENST00000273286 RSPRY1Q96DX4 576 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 TMEM209Q96SK2 561 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 MKRN2Q9H000 416 aaKnown RBP10.37□□□□□ -0.75
LRTM1-201ENST00000273286 SEMA4GQ9NTN9 838 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 GTSE1Q9NYZ3 720 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 CACNA1BQ00975 2339 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 TMEM82A0PJX8 343 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 NOTOA8MTQ0 251 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 KIAA0391O15091 583 aaKnown RBP10.36□□□□□ -0.75
LRTM1-201ENST00000273286 AKAP3O75969 853 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 PRAMEF12O95522 483 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 HAPLN1P10915 354 aaPredicted RBP10.36□□□□□ -0.75
LRTM1-201ENST00000273286 NMT1P30419 496 aaKnown RBP10.36□□□□□ -0.75
LRTM1-201ENST00000273286 RPL10AP62906 217 aaKnown RBP10.36□□□□□ -0.75
LRTM1-201ENST00000273286 ZNF268Q14587 947 aaPredicted RBP10.36□□□□□ -0.75
LRTM1-201ENST00000273286 PON2Q15165 354 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 SF3A1Q15459 793 aaKnown RBP10.36□□□□□ -0.75
LRTM1-201ENST00000273286 CC2D1AQ6P1N0 951 aaPredicted RBP10.36□□□□□ -0.75
LRTM1-201ENST00000273286 CEP128Q6ZU80 1094 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 CEP68Q76N32 757 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 CAMKK1Q8N5S9 505 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 TTC9BQ8N6N2 239 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 LRRC52Q8N7C0 313 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 TRMT2BQ96GJ1 504 aaKnown RBP10.36□□□□□ -0.75
LRTM1-201ENST00000273286 CEP295NLQ96MC4 621 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 SLC6A18Q96N87 628 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 ACBD6Q9BR61 282 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 SPON2Q9BUD6 331 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 KRTAP4-7Q9BYR0 210 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 PARD6AQ9NPB6 346 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 OLFML3Q9NRN5 406 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 TDP1Q9NUW8 608 aa10.36□□□□□ -0.75
LRTM1-201ENST00000273286 R3HCC1Q9Y3T6 440 aaKnown RBP10.36□□□□□ -0.75
LRTM1-201ENST00000273286 SCN1AP35498 2009 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 ANKRD63C9JTQ0 380 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 TRDMT1O14717 391 aaKnown RBP10.35□□□□□ -0.75
LRTM1-201ENST00000273286 HUS1O60921 280 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 SOAT2O75908 522 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 DRD1P21728 446 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 SOX9P48436 509 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 FNTBP49356 437 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 PDE6CP51160 858 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 CYP4F8P98187 520 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 MYL7Q01449 175 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 RUNX3Q13761 415 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 PDGFRLQ15198 375 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 SLC14A2Q15849 920 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 ZC2HC1CQ53FD0 456 aaPredicted RBP10.35□□□□□ -0.75
LRTM1-201ENST00000273286 TMEM196Q5HYL7 178 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 WSCD1Q658N2 575 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 Q6ZS52 159 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 DPH6Q7L8W6 267 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 FSIP1Q8NA03 581 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 FUBP3Q96I24 572 aaKnown RBP eCLIP10.35□□□□□ -0.75
LRTM1-201ENST00000273286 EAF1Q96JC9 268 aaPredicted RBP10.35□□□□□ -0.75
LRTM1-201ENST00000273286 LRRC3BQ96PB8 259 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 ACCSQ96QU6 501 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 SLC46A2Q9BY10 475 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 ZNF552Q9H707 407 aaPredicted RBP10.35□□□□□ -0.75
LRTM1-201ENST00000273286 TMEM206Q9H813 350 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 MRPL44Q9H9J2 332 aaKnown RBP10.35□□□□□ -0.75
LRTM1-201ENST00000273286 GKN1Q9NS71 199 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 RBM12Q9NTZ6 932 aaKnown RBP10.35□□□□□ -0.75
LRTM1-201ENST00000273286 ITGA11Q9UKX5 1188 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 ANK1P16157 1881 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 TCHHQ07283 1943 aa10.35□□□□□ -0.75
LRTM1-201ENST00000273286 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.34□□□□□ -0.75
LRTM1-201ENST00000273286 TNFRSF10CO14798 259 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 SEMA7AO75326 666 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 ADRB1P08588 477 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 ZNF16P17020 682 aaPredicted RBP10.34□□□□□ -0.75
LRTM1-201ENST00000273286 PFKLP17858 780 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 PCSK1P29120 753 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 KIR2DL1P43626 348 aaPredicted RBP10.34□□□□□ -0.75
LRTM1-201ENST00000273286 KIR2DL2P43627 348 aaPredicted RBP10.34□□□□□ -0.75
LRTM1-201ENST00000273286 LHX1P48742 406 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 LIMK1P53667 647 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 DLG4P78352 724 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 MAPRE1Q15691 268 aaKnown RBP10.34□□□□□ -0.75
LRTM1-201ENST00000273286 LPAL2Q16609 132 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 CFAP221Q4G0U5 840 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 ADGRF1Q5T601 910 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 L1TD1Q5T7N2 865 aaKnown RBP10.34□□□□□ -0.75
LRTM1-201ENST00000273286 CRELD2Q6UXH1 353 aaPredicted RBP10.34□□□□□ -0.75
LRTM1-201ENST00000273286 CCDC73Q6ZRK6 1079 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 STXBP4Q6ZWJ1 553 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 CACNA2D4Q7Z3S7 1137 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 LRRTM3Q86VH5 581 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 MON1AQ86VX9 555 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 SFR1Q86XK3 245 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 BRSK2Q8IWQ3 736 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 EFCAB13Q8IY85 973 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 CPA6Q8N4T0 437 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 GAB3Q8WWW8 586 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 ZFYVE19Q96K21 471 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 STRA6Q9BX79 667 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 EHD2Q9NZN4 543 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms