RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 KCNH7Q9NS40 1196 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 DDX56Q9NY93 547 aaKnown RBP16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 MOSPD1Q9UJG1 213 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 SQORQ9Y6N5 450 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 LOC105371267A0A1B0GV96 52 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 TMEM150BA6NC51 233 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 KLF11O14901 512 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 PLA2G6O60733 806 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 FAM13AO94988 1023 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 KRT10P13645 584 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 ZNF182P17025 639 aaPredicted RBP16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 CYP2J2P51589 502 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 MRPS9P82933 396 aaKnown RBP16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 CENPCQ03188 943 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 PTK7Q13308 1070 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 TBCCQ15814 346 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 PERM1Q5SV97 790 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 RNASEH2BQ5TBB1 312 aaKnown RBP16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 RNF19BQ6ZMZ0 732 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 EEPD1Q7L9B9 569 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 EFHD2Q96C19 240 aaPredicted RBP16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 MXRA8Q9BRK3 442 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 ACSS3Q9H6R3 686 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 CLK4Q9HAZ1 481 aaKnown RBP16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 TUFT1Q9NNX1 390 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 GINM1Q9NU53 330 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 DAPK2Q9UIK4 370 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 HACL1Q9UJ83 578 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 NOCTQ9UK39 431 aaKnown RBP16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 ST14Q9Y5Y6 855 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 GIPC1O14908 333 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 ZNF26P17031 533 aaPredicted RBP16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 FGFR3P22607 806 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 FMO1Q01740 532 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 NME3Q13232 169 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 PPP2R5DQ14738 602 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 CLEC16AQ2KHT3 1053 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 MYO1HQ8N1T3 1032 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 SLC16A10Q8TF71 515 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 KBTBD7Q8WVZ9 684 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 RMND5BQ96G75 393 aaPredicted RBP16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 FIZ1Q96SL8 496 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 VPS33BQ9H267 617 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 SEMA6AQ9H2E6 1030 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 C10orf88Q9H8K7 445 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 FBXO9Q9UK97 447 aaPredicted RBP16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 MYRFQ9Y2G1 1151 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 PCDHGA8Q9Y5G5 932 aa16.16■□□□□ 0.18
CTDSP1-201ENST00000273062 ARHGEF37A1IGU5 675 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 MAPK4P31152 587 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 MXI1P50539 228 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 TPTEP56180 551 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 WDR45BQ5MNZ6 344 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 LDLRAP1Q5SW96 308 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 GALNT18Q6P9A2 607 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 ADCY4Q8NFM4 1077 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 CAPSLQ8WWF8 208 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 IFT122Q9HBG6 1241 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 RSL1D1O76021 490 aaKnown RBP16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 XRCC1P18887 633 aaPredicted RBP16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 GRIA3P42263 894 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 TGFB2P61812 414 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 DLG4P78352 724 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 MRPS5P82675 430 aaKnown RBP16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 WASHC5Q12768 1159 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 OXA1LQ15070 435 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 HIF1AQ16665 826 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 VWA5B1Q5TIE3 1220 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 B3GNT9Q6UX72 402 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 CARM1Q86X55 608 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 RHPN2Q8IUC4 686 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 CLIP4Q8N3C7 705 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 FBXO36Q8NEA4 188 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 PDZD8Q8NEN9 1154 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 TEKT3Q9BXF9 490 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 FOXP3Q9BZS1 431 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 TMEM117Q9H0C3 514 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 DEFB129Q9H1M3 183 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 VPS45Q9NRW7 570 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 GTF3C4Q9UKN8 822 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 C1orf232A0A0U1RR37 186 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 PI4K2BG5E9Z4 385 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 MYO1DO94832 1006 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 IFNB1P01574 187 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 ERBB2P04626 1255 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 PSMC2P35998 433 aaKnown RBP16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 NR4A2P43354 598 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 ZNF280AP59817 542 aaPredicted RBP16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 SLC18A2Q05940 514 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 SPP2Q13103 211 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 ATG14Q6ZNE5 492 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 MAVSQ7Z434 540 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 PTAR1Q7Z6K3 402 aaPredicted RBP16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 DSG4Q86SJ6 1040 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 ITIH5Q86UX2 942 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 CRLF3Q8IUI8 442 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 SLC38A6Q8IZM9 456 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 OR7G1Q8NGA0 311 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 TAAR1Q96RJ0 339 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms