RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 MLH1P40692 756 aa22.82■■□□□ 1.24
CDR2-201ENST00000268383 PKDCCQ504Y2 493 aa22.82■■□□□ 1.24
CDR2-201ENST00000268383 NCBP2-AS2Q69YL0 99 aa22.82■■□□□ 1.24
CDR2-201ENST00000268383 CMC1Q7Z7K0 106 aa22.82■■□□□ 1.24
CDR2-201ENST00000268383 PIWIL2Q8TC59 973 aaKnown RBP22.82■■□□□ 1.24
CDR2-201ENST00000268383 NLRP7Q8WX94 980 aa22.82■■□□□ 1.24
CDR2-201ENST00000268383 C18orf25Q96B23 403 aaPredicted RBP22.82■■□□□ 1.24
CDR2-201ENST00000268383 ASB7Q9H672 318 aa22.82■■□□□ 1.24
CDR2-201ENST00000268383 NDE1Q9NXR1 346 aa22.82■■□□□ 1.24
CDR2-201ENST00000268383 CNMDO75829 334 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 PITX1P78337 314 aaPredicted RBP22.81■■□□□ 1.24
CDR2-201ENST00000268383 WASHC5Q12768 1159 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 PCLAFQ15004 111 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 PACS1Q6VY07 963 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 HACE1Q8IYU2 909 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 TNS4Q8IZW8 715 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 OR6B3Q8NGW1 331 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 OTUD5Q96G74 571 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 SLC4A5Q9BY07 1137 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 FRMD8Q9BZ67 464 aaPredicted RBP22.81■■□□□ 1.24
CDR2-201ENST00000268383 MAN1C1Q9NR34 630 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 TMEM216Q9P0N5 145 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 TUBGCP4Q9UGJ1 667 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 ANGPTL2Q9UKU9 493 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 MDM4O15151 490 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 PRKCGP05129 697 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 STILQ15468 1287 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 TRMT5Q32P41 509 aaKnown RBP22.81■■□□□ 1.24
CDR2-201ENST00000268383 COLGALT1Q8NBJ5 622 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 AZIN2Q96A70 460 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 LRRC39Q96DD0 335 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 DPYSL4O14531 572 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 POLE2P56282 527 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 LPCAT4Q643R3 524 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 IFT43Q96FT9 208 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 TUBGCP5Q96RT8 1024 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 PAPOLBQ9NRJ5 636 aaKnown RBP22.81■■□□□ 1.24
CDR2-201ENST00000268383 MKS1Q9NXB0 559 aa22.81■■□□□ 1.24
CDR2-201ENST00000268383 F8W8V4 182 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 SIN3BO75182 1162 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 USP12O75317 370 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 PROCP04070 461 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 PGGT1BP53609 377 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 C6orf163Q5TEZ5 329 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 ZNF772Q68DY9 489 aaPredicted RBP22.8■■□□□ 1.24
CDR2-201ENST00000268383 TMEM110Q86TL2 294 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 WDR75Q8IWA0 830 aaKnown RBP22.8■■□□□ 1.24
CDR2-201ENST00000268383 HTR3CQ8WXA8 447 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 TBCBQ99426 244 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 SORT1Q99523 831 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 SYBUQ9NX95 663 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 SOX13Q9UN79 622 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 BIRC5O15392 142 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 MFSD11O43934 449 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 PLIN3O60664 434 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 NCF2P19878 526 aaPredicted RBP22.8■■□□□ 1.24
CDR2-201ENST00000268383 TPSB2P20231 275 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 AP2B1P63010 937 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 CDC16Q13042 620 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 TPSAB1Q15661 275 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 RABGAP1LQ5R372 815 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 ZNF618Q5T7W0 954 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 MOB2Q70IA6 237 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 ARNTL2Q8WYA1 636 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 ECSITQ9BQ95 431 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 ELP3Q9H9T3 547 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 GJD2Q9UKL4 321 aa22.8■■□□□ 1.24
CDR2-201ENST00000268383 TNFAIP2Q03169 654 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 USP4Q13107 963 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 DPYSL2Q16555 572 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 DNAL1Q4LDG9 190 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 TCHHL1Q5QJ38 904 aaPredicted RBP22.79■■□□□ 1.24
CDR2-201ENST00000268383 SLC30A9Q6PML9 568 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 PHTF2Q8N3S3 785 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 QKIQ96PU8 341 aaKnown RBP eCLIP22.79■■□□□ 1.241e-8■■■□□ 15.2
CDR2-201ENST00000268383 EBF3Q9H4W6 596 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 ITGA11Q9UKX5 1188 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 FZD9O00144 591 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 LMO2P25791 158 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 PSMB4P28070 264 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 SEMA5AQ13591 1074 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 ITGA9Q13797 1035 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 HIC1Q14526 733 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 SLC26A7Q8TE54 656 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 PGBD4Q96DM1 585 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 PPP1R36Q96LQ0 422 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 SNTG2Q9NY99 539 aa22.79■■□□□ 1.24
CDR2-201ENST00000268383 APOBEC2Q9Y235 224 aaKnown RBP22.79■■□□□ 1.24
CDR2-201ENST00000268383 TSPAN1O60635 241 aa22.78■■□□□ 1.24
CDR2-201ENST00000268383 LYNP07948 512 aa22.78■■□□□ 1.24
CDR2-201ENST00000268383 IDH3AP50213 366 aa22.78■■□□□ 1.24
CDR2-201ENST00000268383 SERPINB9P50453 376 aa22.78■■□□□ 1.24
CDR2-201ENST00000268383 DSG1Q02413 1049 aa22.78■■□□□ 1.24
CDR2-201ENST00000268383 ZRSR2Q15696 482 aaKnown RBP22.78■■□□□ 1.24
CDR2-201ENST00000268383 AGAP3Q96P47 875 aa22.78■■□□□ 1.24
CDR2-201ENST00000268383 A0A0G2JMZ2 1700 aa22.78■■□□□ 1.24
CDR2-201ENST00000268383 LRRC37A2A6NM11 1700 aa22.78■■□□□ 1.24
CDR2-201ENST00000268383 MAGEA13PA6NCF6 341 aa22.78■■□□□ 1.24
CDR2-201ENST00000268383 CLGNO14967 610 aa22.78■■□□□ 1.24
CDR2-201ENST00000268383 FESP07332 822 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms