RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 OR12D3Q9UGF7 316 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 H2AFYO75367 372 aaKnown RBP15.8■□□□□ 0.12
TIMP3-201ENST00000266085 SPDYE7PQ495Y7 208 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 ZC3H12AQ5D1E8 599 aaKnown RBP15.8■□□□□ 0.12
TIMP3-201ENST00000266085 PTAR1Q7Z6K3 402 aaPredicted RBP15.8■□□□□ 0.12
TIMP3-201ENST00000266085 TAGAPQ8N103 731 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 KREMEN1Q96MU8 473 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 PRKD2Q9BZL6 878 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 RBPJLQ9UBG7 517 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 ARHGAP26Q9UNA1 814 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 BTNL10A8MVZ5 291 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 ADAMTS3O15072 1205 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 MARCKSL1P49006 195 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 ZNF844Q08AG5 666 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 TRIP10Q15642 601 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 CYP4F12Q9HCS2 524 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 NINJ2Q9NZG7 142 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 STX18Q9P2W9 335 aaKnown RBP15.8■□□□□ 0.12
TIMP3-201ENST00000266085 ZSCAN5DPP0CG00 497 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 RPL9P32969 192 aaKnown RBP15.8■□□□□ 0.12
TIMP3-201ENST00000266085 PLD1Q13393 1074 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 PHF13Q86YI8 300 aaPredicted RBP15.8■□□□□ 0.12
TIMP3-201ENST00000266085 ZNF558Q96NG5 402 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 DOLKQ9UPQ8 538 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 GIT1Q9Y2X7 761 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 IPPQ9Y573 584 aa15.8■□□□□ 0.12
TIMP3-201ENST00000266085 MAFBQ9Y5Q3 323 aaPredicted RBP15.8■□□□□ 0.12
TIMP3-201ENST00000266085 LOC102724159A0A0B4J2E5 919 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 USP12O75317 370 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 TARSP26639 723 aaKnown RBP15.79■□□□□ 0.12
TIMP3-201ENST00000266085 ATXN3P54252 364 aaPredicted RBP15.79■□□□□ 0.12
TIMP3-201ENST00000266085 CSHL1Q14406 222 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 PWP2Q15269 919 aaKnown RBP15.79■□□□□ 0.12
TIMP3-201ENST00000266085 ZNF284Q2VY69 593 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 AASDHQ4L235 1098 aaPredicted RBP15.79■□□□□ 0.12
TIMP3-201ENST00000266085 OTUB1Q96FW1 271 aaPredicted RBP15.79■□□□□ 0.12
TIMP3-201ENST00000266085 NAF1Q96HR8 494 aaKnown RBP15.79■□□□□ 0.12
TIMP3-201ENST00000266085 GOLGA2P5Q9HBQ8 144 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 COL1A2P08123 1366 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 C5orf58C9J3I9 102 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 SPTLC1O15269 473 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 B4GALT4O60513 344 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 CKBP12277 381 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 BRCC3P46736 316 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 MED21Q13503 144 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 ITIH4Q14624 930 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 PKN3Q6P5Z2 889 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 C18orf25Q96B23 403 aaPredicted RBP15.79■□□□□ 0.12
TIMP3-201ENST00000266085 TSC22D3Q99576 134 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 PRPF18Q99633 342 aaKnown RBP15.79■□□□□ 0.12
TIMP3-201ENST00000266085 CCND1P24385 295 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 ATP5C1P36542 298 aaKnown RBP15.79■□□□□ 0.12
TIMP3-201ENST00000266085 PBX1P40424 430 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 CD151P48509 253 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 KBTBD12Q3ZCT8 623 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 SEL1L3Q68CR1 1132 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 LPCAT1Q8NF37 534 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 SPATA16Q9BXB7 569 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 IL1RL2Q9HB29 575 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 FAM32AQ9Y421 112 aaKnown RBP15.79■□□□□ 0.12
TIMP3-201ENST00000266085 EVPLLA8MZ36 301 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 DUSP11O75319 330 aaKnown RBP15.79■□□□□ 0.12
TIMP3-201ENST00000266085 MGAT1P26572 445 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 NPY2RP49146 381 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 DAB2IPQ5VWQ8 1189 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 MYO1HQ8N1T3 1032 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 UROC1Q96N76 676 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 SNRNP25Q9BV90 132 aaKnown RBP15.79■□□□□ 0.12
TIMP3-201ENST00000266085 CHCHD3Q9NX63 227 aaKnown RBP15.79■□□□□ 0.12
TIMP3-201ENST00000266085 DNAJC16Q9Y2G8 782 aa15.79■□□□□ 0.12
TIMP3-201ENST00000266085 NCANO14594 1321 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 SMIM28A0A1B0GU29 152 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 ASGR1P07306 291 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 GRK4P32298 578 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 ARL2P36404 184 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 NUDT2P50583 147 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 DPYSL3Q14195 570 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 KRT72Q14CN4 511 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 RPAINQ86UA6 219 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 LENG1Q96BZ8 264 aaPredicted RBP15.78■□□□□ 0.12
TIMP3-201ENST00000266085 LRRC39Q96DD0 335 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 CAPNS2Q96L46 248 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 PRDM16Q9HAZ2 1276 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 CLDN5O00501 218 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 AQP5P55064 265 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 LRRC74AQ0VAA2 488 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 DDX39BQ13838 428 aaKnown RBP15.78■□□□□ 0.12
TIMP3-201ENST00000266085 NOL9Q5SY16 702 aaKnown RBP15.78■□□□□ 0.12
TIMP3-201ENST00000266085 ZCCHC9Q8N567 271 aaKnown RBP15.78■□□□□ 0.12
TIMP3-201ENST00000266085 PGM2Q96G03 612 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 ZNF333Q96JL9 665 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 MAF1Q9H063 256 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 ST6GALNAC4Q9H4F1 302 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 UXTQ9UBK9 157 aaPredicted RBP15.78■□□□□ 0.12
TIMP3-201ENST00000266085 SCAMP3O14828 347 aaKnown RBP15.78■□□□□ 0.12
TIMP3-201ENST00000266085 CST3P01034 146 aaPredicted RBP15.78■□□□□ 0.12
TIMP3-201ENST00000266085 CYP2C18P33260 490 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 HIST2H2ACQ16777 129 aaPredicted RBP15.78■□□□□ 0.12
TIMP3-201ENST00000266085 PPP1R26Q5T8A7 1209 aaPredicted RBP15.78■□□□□ 0.12
TIMP3-201ENST00000266085 HIST2H2AA3Q6FI13 130 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms