RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 COL19A1Q14993 1142 aa28.49■■■□□ 2.15
SMARCD3-201ENST00000262188 TADA2BQ86TJ2 420 aa28.49■■■□□ 2.15
SMARCD3-201ENST00000262188 LEMD2Q8NC56 503 aa28.49■■■□□ 2.15
SMARCD3-201ENST00000262188 DHX35Q9H5Z1 703 aaKnown RBP28.49■■■□□ 2.15
SMARCD3-201ENST00000262188 SNX12Q9UMY4 172 aa28.49■■■□□ 2.15
SMARCD3-201ENST00000262188 MIF4GDA9UHW6 222 aaKnown RBP28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 FAM72CH0Y354 149 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 PRAMEF12O95522 483 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 FGF19O95750 216 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 CCR1P32246 355 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 SKIV2LQ15477 1246 aaKnown RBP28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 ARHGAP15Q53QZ3 475 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 ERMARDQ5T6L9 678 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 FAM72AQ5TYM5 149 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 FAM72DQ6L9T8 149 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 FAM72BQ86X60 149 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 UBL4BQ8N7F7 174 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 RIN3Q8TB24 985 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 OSBPL9Q96SU4 736 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 TASP1Q9H6P5 420 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 ZNF197O14709 1029 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 STC2O76061 302 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 IGLV3-27P01718 113 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 LMAN1P49257 510 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 AMPD2Q01433 879 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 CMTM8Q8IZV2 173 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 MS4A14Q96JA4 679 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 KCTD15Q96SI1 283 aaPredicted RBP28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 SIK2Q9H0K1 926 aa28.48■■■□□ 2.15
SMARCD3-201ENST00000262188 CLUHO75153 1309 aa28.47■■■□□ 2.15
SMARCD3-201ENST00000262188 LRRD1A4D1F6 860 aa28.47■■■□□ 2.15
SMARCD3-201ENST00000262188 KCNU1A8MYU2 1149 aa28.47■■■□□ 2.15
SMARCD3-201ENST00000262188 PAGE1O75459 146 aa28.47■■■□□ 2.15
SMARCD3-201ENST00000262188 KLKB1P03952 638 aa28.47■■■□□ 2.15
SMARCD3-201ENST00000262188 RWDD2BP57060 319 aa28.47■■■□□ 2.15
SMARCD3-201ENST00000262188 MMRN1Q13201 1228 aa28.47■■■□□ 2.15
SMARCD3-201ENST00000262188 PPP6R3Q5H9R7 873 aaPredicted RBP28.47■■■□□ 2.15
SMARCD3-201ENST00000262188 LRRC38Q5VT99 294 aa28.47■■■□□ 2.15
SMARCD3-201ENST00000262188 PAPD7Q5XG87 772 aaKnown RBP28.47■■■□□ 2.15
SMARCD3-201ENST00000262188 MTMR10Q9NXD2 777 aa28.47■■■□□ 2.15
SMARCD3-201ENST00000262188 ARHGEF38Q9NXL2 777 aa28.47■■■□□ 2.15
SMARCD3-201ENST00000262188 KRT7P08729 469 aa28.46■■■□□ 2.15
SMARCD3-201ENST00000262188 POLNQ7Z5Q5 900 aa28.46■■■□□ 2.15
SMARCD3-201ENST00000262188 NPAS3Q8IXF0 933 aa28.46■■■□□ 2.15
SMARCD3-201ENST00000262188 KATNAL2Q8IYT4 538 aa28.46■■■□□ 2.15
SMARCD3-201ENST00000262188 CAPZA3Q96KX2 299 aa28.46■■■□□ 2.15
SMARCD3-201ENST00000262188 HERPUD2Q9BSE4 406 aa28.46■■■□□ 2.15
SMARCD3-201ENST00000262188 HBS1LQ9Y450 684 aaKnown RBP28.46■■■□□ 2.15
SMARCD3-201ENST00000262188 URI1O94763 535 aaPredicted RBP28.46■■■□□ 2.15
SMARCD3-201ENST00000262188 CDH6P55285 790 aa28.46■■■□□ 2.15
SMARCD3-201ENST00000262188 CES5AQ6NT32 575 aa28.46■■■□□ 2.15
SMARCD3-201ENST00000262188 MFSD7Q6UXD7 560 aa28.46■■■□□ 2.15
SMARCD3-201ENST00000262188 KCTD6Q8NC69 237 aa28.46■■■□□ 2.15
SMARCD3-201ENST00000262188 FGF13Q92913 245 aa28.46■■■□□ 2.15
SMARCD3-201ENST00000262188 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.46■■■□□ 2.15
SMARCD3-201ENST00000262188 GOLGA6L7A0A1B0GV03 622 aa28.45■■■□□ 2.14
SMARCD3-201ENST00000262188 KCNA5P22460 613 aa28.45■■■□□ 2.14
SMARCD3-201ENST00000262188 SP100P23497 879 aaPredicted RBP28.45■■■□□ 2.14
SMARCD3-201ENST00000262188 AVPR1AP37288 418 aa28.45■■■□□ 2.14
SMARCD3-201ENST00000262188 PPP2R5DQ14738 602 aa28.45■■■□□ 2.14
SMARCD3-201ENST00000262188 BOLA3Q53S33 107 aa28.45■■■□□ 2.14
SMARCD3-201ENST00000262188 ATAT1Q5SQI0 421 aa28.45■■■□□ 2.14
SMARCD3-201ENST00000262188 DENND1CQ8IV53 801 aa28.45■■■□□ 2.14
SMARCD3-201ENST00000262188 CCDC50Q8IVM0 306 aa28.45■■■□□ 2.14
SMARCD3-201ENST00000262188 USP13Q92995 863 aaPredicted RBP28.45■■■□□ 2.14
SMARCD3-201ENST00000262188 POMKQ9H5K3 350 aa28.45■■■□□ 2.14
SMARCD3-201ENST00000262188 SBDSQ9Y3A5 250 aaKnown RBP eCLIP28.45■■■□□ 2.14
SMARCD3-201ENST00000262188 C3orf70A6NLC5 250 aaPredicted RBP28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 CORO1AP31146 461 aaKnown RBP28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 L1CAMP32004 1257 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 SLC7A9P82251 487 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 COG7P83436 770 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 ITIH3Q06033 890 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 NNTQ13423 1086 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 PIK3R6Q5UE93 754 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 GPR153Q6NV75 609 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 GPR161Q8N6U8 529 aaKnown RBP28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 NTAN1Q96AB6 310 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 CALN1Q9BXU9 219 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 PCDH18Q9HCL0 1135 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 CFAP97Q9P2B7 532 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 SAR1BQ9Y6B6 198 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 APOEP02649 317 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 KRT10P13645 584 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 KDELR1P24390 212 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 ARSEP51690 589 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 EFHC2Q5JST6 749 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 BRMS1LQ5PSV4 323 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 ARID3BQ8IVW6 561 aaPredicted RBP28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 SMRP1Q8NCR6 262 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 ZSCAN18Q8TBC5 510 aaPredicted RBP28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 TEKT4Q8WW24 435 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 MYEOVQ96EZ4 313 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 HEMGNQ9BXL5 484 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 HS3ST4Q9Y661 456 aa28.44■■■□□ 2.14
SMARCD3-201ENST00000262188 CREB3O43889 395 aa28.43■■■□□ 2.14
SMARCD3-201ENST00000262188 CEP104O60308 925 aa28.43■■■□□ 2.14
SMARCD3-201ENST00000262188 KRT81Q14533 505 aa28.43■■■□□ 2.14
SMARCD3-201ENST00000262188 C11orf91Q3C1V1 193 aa28.43■■■□□ 2.14
SMARCD3-201ENST00000262188 ARL13BQ3SXY8 428 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms