RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 ADORA2BP29275 332 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 SERPINB3P29508 390 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 ANKRD52Q8NB46 1076 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 STKLD1Q8NE28 680 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 BRI3BPQ8WY22 251 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 APOPT1Q96IL0 206 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 TINF2Q9BSI4 451 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 MTO1Q9Y2Z2 717 aaKnown RBP23.3■■□□□ 1.32
MCF2L-201ENST00000261963 RPS6KL1Q9Y6S9 549 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 RRN3P2A6NIE6 340 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 AMPD1P23109 780 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 RPL34P49207 117 aaKnown RBP23.29■■□□□ 1.32
MCF2L-201ENST00000261963 BST2Q10589 180 aaKnown RBP23.29■■□□□ 1.32
MCF2L-201ENST00000261963 SKA1Q96BD8 255 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 ECSITQ9BQ95 431 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 DHX35Q9H5Z1 703 aaKnown RBP23.29■■□□□ 1.32
MCF2L-201ENST00000261963 MANSC1Q9H8J5 431 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 ZC3H7BQ9UGR2 993 aaKnown RBP23.29■■□□□ 1.32
MCF2L-201ENST00000261963 SLC45A1Q9Y2W3 748 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 CCL15-CCL14A0A0B4J2E2 113 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 F8W8V4 182 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 METTL18O95568 372 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 SNX16P57768 344 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 CDK16Q00536 496 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 CCL15Q16663 113 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 ZNF618Q5T7W0 954 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 ZNF534Q76KX8 674 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 SLC26A11Q86WA9 606 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 KCTD15Q96SI1 283 aaPredicted RBP23.29■■□□□ 1.32
MCF2L-201ENST00000261963 APOL6Q9BWW8 343 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 ABHD16BQ9H3Z7 469 aa23.29■■□□□ 1.32
MCF2L-201ENST00000261963 PIRO00625 290 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 SMIM10L2AP0DMW4 78 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 SMIM10L2BP0DMW5 78 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 RARBP10826 455 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 DARSP14868 501 aaKnown RBP23.28■■□□□ 1.32
MCF2L-201ENST00000261963 ANPEPP15144 967 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 MAGEA3P43357 314 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 RAP1GDS1P52306 607 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 DPY19L2Q6NUT2 758 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 MARK2Q7KZI7 788 aaKnown RBP23.28■■□□□ 1.32
MCF2L-201ENST00000261963 CDKL3Q8IVW4 592 aaPredicted RBP23.28■■□□□ 1.32
MCF2L-201ENST00000261963 ST13P4Q8IZP2 240 aaPredicted RBP23.28■■□□□ 1.32
MCF2L-201ENST00000261963 CRYBG2Q8N1P7 616 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 PPM1NQ8N819 430 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 SMYD2Q9NRG4 433 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 UBQLN1Q9UMX0 589 aaKnown RBP23.28■■□□□ 1.32
MCF2L-201ENST00000261963 AP4E1Q9UPM8 1137 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 LCP1P13796 627 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 DESP17661 470 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 PRKCHP24723 683 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 BCAT1P54687 386 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 HIC1Q14526 733 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 MYBPC3Q14896 1274 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 FBXO47Q5MNV8 452 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 CHSY1Q86X52 802 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 RBM12BQ8IXT5 1001 aaKnown RBP23.28■■□□□ 1.32
MCF2L-201ENST00000261963 CCDC33Q8N5R6 958 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 CCDC185Q8N715 623 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 MCUQ8NE86 351 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 PRR11Q96HE9 360 aaPredicted RBP23.28■■□□□ 1.32
MCF2L-201ENST00000261963 FAM161BQ96MY7 647 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 FAM111AQ96PZ2 611 aa23.28■■□□□ 1.32
MCF2L-201ENST00000261963 FBXO6Q9NRD1 293 aaPredicted RBP23.28■■□□□ 1.32
MCF2L-201ENST00000261963 SLC15A5A6NIM6 579 aa23.27■■□□□ 1.32
MCF2L-201ENST00000261963 GCATO75600 419 aa23.27■■□□□ 1.32
MCF2L-201ENST00000261963 IQSEC1Q6DN90 963 aa23.27■■□□□ 1.32
MCF2L-201ENST00000261963 RFX8Q6ZV50 586 aa23.27■■□□□ 1.32
MCF2L-201ENST00000261963 ARCQ7LC44 396 aa23.27■■□□□ 1.32
MCF2L-201ENST00000261963 NPLOC4Q8TAT6 608 aa23.27■■□□□ 1.32
MCF2L-201ENST00000261963 CSPG4P5Q96PW8 444 aa23.27■■□□□ 1.32
MCF2L-201ENST00000261963 TMEM120AQ9BXJ8 343 aa23.27■■□□□ 1.32
MCF2L-201ENST00000261963 GTF2IRD1Q9UHL9 959 aa23.27■■□□□ 1.32
MCF2L-201ENST00000261963 TRIM49D1C9J1S8 452 aa23.27■■□□□ 1.31
MCF2L-201ENST00000261963 MAGEC1O60732 1142 aa23.27■■□□□ 1.31
MCF2L-201ENST00000261963 CRABP2P29373 138 aa23.27■■□□□ 1.31
MCF2L-201ENST00000261963 GNL1P36915 607 aaPredicted RBP23.27■■□□□ 1.31
MCF2L-201ENST00000261963 LRRC6Q86X45 466 aa23.27■■□□□ 1.31
MCF2L-201ENST00000261963 CTAGE3PQ8IX95 158 aa23.27■■□□□ 1.31
MCF2L-201ENST00000261963 TMEM40Q8WWA1 233 aa23.27■■□□□ 1.31
MCF2L-201ENST00000261963 PPP2R3CQ969Q6 453 aa23.27■■□□□ 1.31
MCF2L-201ENST00000261963 TRIM56Q9BRZ2 755 aaKnown RBP23.27■■□□□ 1.31
MCF2L-201ENST00000261963 PREBQ9HCU5 417 aa23.27■■□□□ 1.31
MCF2L-201ENST00000261963 GALNT8Q9NY28 637 aa23.27■■□□□ 1.31
MCF2L-201ENST00000261963 KLK14Q9P0G3 267 aa23.27■■□□□ 1.31
MCF2L-201ENST00000261963 MFHAS1Q9Y4C4 1052 aa23.27■■□□□ 1.31
MCF2L-201ENST00000261963 SMIM28A0A1B0GU29 152 aa23.26■■□□□ 1.31
MCF2L-201ENST00000261963 A6NJR5 290 aa23.26■■□□□ 1.31
MCF2L-201ENST00000261963 ETS2P15036 469 aa23.26■■□□□ 1.31
MCF2L-201ENST00000261963 SCNN1AP37088 669 aa23.26■■□□□ 1.31
MCF2L-201ENST00000261963 TTC39BQ5VTQ0 682 aaPredicted RBP23.26■■□□□ 1.31
MCF2L-201ENST00000261963 KCNT2Q6UVM3 1135 aa23.26■■□□□ 1.31
MCF2L-201ENST00000261963 UNC5AQ6ZN44 842 aa23.26■■□□□ 1.31
MCF2L-201ENST00000261963 CDHR3Q6ZTQ4 885 aa23.26■■□□□ 1.31
MCF2L-201ENST00000261963 TSSK1BQ9BXA7 367 aa23.26■■□□□ 1.31
MCF2L-201ENST00000261963 ZNF408Q9H9D4 720 aa23.26■■□□□ 1.31
MCF2L-201ENST00000261963 DNAAF2Q9NVR5 837 aaKnown RBP23.26■■□□□ 1.31
MCF2L-201ENST00000261963 NDE1Q9NXR1 346 aa23.26■■□□□ 1.31
MCF2L-201ENST00000261963 TBC1D30Q9Y2I9 924 aa23.26■■□□□ 1.31
MCF2L-201ENST00000261963 MBLAC1A4D2B0 266 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms