RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 AGAP2Q99490 1192 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 CIB1Q99828 191 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 CNPY3Q9BT09 278 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 HAUS8Q9BT25 410 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 IDI2Q9BXS1 227 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 ILKAPQ9H0C8 392 aaPredicted RBP10.38□□□□□ -0.75
PALB2-201ENST00000261584 PCDHAC1Q9H158 963 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 UPF3AQ9H1J1 476 aaKnown RBP10.38□□□□□ -0.75
PALB2-201ENST00000261584 ACTL7BQ9Y614 415 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 SPEF2Q9C093 1822 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 SDR42E2A6NKP2 422 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 ZNF839A8K0R7 811 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 DHX15O43143 795 aaKnown RBP10.37□□□□□ -0.75
PALB2-201ENST00000261584 ITGAVP06756 1048 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 PSMC3P17980 439 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 EEF1DP29692 281 aaKnown RBP10.37□□□□□ -0.75
PALB2-201ENST00000261584 TSPY1Q01534 308 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 ADGRD1Q6QNK2 874 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 TSHZ1Q6ZSZ6 1077 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 BBS12Q6ZW61 710 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 ARHGAP18Q8N392 663 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 C12orf50Q8NA57 414 aaPredicted RBP10.37□□□□□ -0.75
PALB2-201ENST00000261584 SKA2Q8WVK7 121 aaPredicted RBP10.37□□□□□ -0.75
PALB2-201ENST00000261584 C7orf43Q8WVR3 580 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 SLC44A1Q8WWI5 657 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 SEPT1Q8WYJ6 367 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 PABPC5Q96DU9 382 aaKnown RBP10.37□□□□□ -0.75
PALB2-201ENST00000261584 COG4Q9H9E3 785 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 UTP6Q9NYH9 597 aaKnown RBP10.37□□□□□ -0.75
PALB2-201ENST00000261584 GGA3Q9NZ52 723 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 PSAT1Q9Y617 370 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 AP4B1Q9Y6B7 739 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 NUMBLQ9Y6R0 609 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 STRCP1A6NGW2 1772 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 SCN11AQ9UI33 1791 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 CITO14578 2027 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 TYROBPO43914 113 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 VAPBO95292 243 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 GSSP48637 474 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 CYLC2Q14093 348 aaPredicted RBP10.37□□□□□ -0.75
PALB2-201ENST00000261584 MTX3Q5HYI7 312 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 LRRC8BQ6P9F7 803 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 SCN4BQ8IWT1 228 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 MIER2Q8N344 545 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 MPHOSPH6Q99547 160 aaKnown RBP10.37□□□□□ -0.75
PALB2-201ENST00000261584 SLC39A3Q9BRY0 314 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 ARMC7Q9H6L4 198 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 TRPC7Q9HCX4 862 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 STK32BQ9NY57 414 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 KCNK4Q9NYG8 393 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 SNX10Q9Y5X0 201 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 UBIAD1Q9Y5Z9 338 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 ROBO1Q9Y6N7 1651 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 YDJCA8MPS7 323 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 TMEM233B4DJY2 109 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 TK2O00142 265 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 CLDN5O00501 218 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 MAGEB3O15480 346 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 DNAJA2O60884 412 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 TM7SF2O76062 418 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 TRUB2O95900 331 aaKnown RBP10.37□□□□□ -0.75
PALB2-201ENST00000261584 ATXN8OSP0DMR3 200 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 HDCP19113 662 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 RPL10P27635 214 aaKnown RBP10.37□□□□□ -0.75
PALB2-201ENST00000261584 TPI1P60174 286 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 CXCL9Q07325 125 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 TSTA3Q13630 321 aaPredicted RBP10.37□□□□□ -0.75
PALB2-201ENST00000261584 MAPK11Q15759 364 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 TTC33Q6PID6 262 aaPredicted RBP10.37□□□□□ -0.75
PALB2-201ENST00000261584 MFSD3Q96ES6 412 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 GOLGA2P5Q9HBQ8 144 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 MYOZ2Q9NPC6 264 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 WDR35Q9P2L0 1181 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 BCAP29Q9UHQ4 241 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 DSEQ9UL01 958 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 LRRC42Q9Y546 428 aa10.37□□□□□ -0.75
PALB2-201ENST00000261584 LINC00854A0A1B0GVQ3 168 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 NEMP2A6NFY4 417 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 ABHD2P08910 425 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 TFPTP0C1Z6 253 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 COX4I1P13073 169 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 NCAM1P13591 858 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 ACO1P21399 889 aaKnown RBP10.36□□□□□ -0.75
PALB2-201ENST00000261584 ADARP55265 1226 aaKnown RBP10.36□□□□□ -0.75
PALB2-201ENST00000261584 CDH13P55290 713 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 SNX16P57768 344 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 ACVR2BQ13705 512 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 CERCAMQ5T4B2 595 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 SEL1L3Q68CR1 1132 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 MTHFD1LQ6UB35 978 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 VSIG10LQ86VR7 867 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 PHF13Q86YI8 300 aaPredicted RBP10.36□□□□□ -0.75
PALB2-201ENST00000261584 GALNT15Q8N3T1 639 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 KCTD4Q8WVF5 259 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 BHMTQ93088 406 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 S100A14Q9HCY8 104 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 SYBUQ9NX95 663 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 SNCAIPQ9Y6H5 919 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 ARHGAP10A1A4S6 786 aa10.36□□□□□ -0.75
PALB2-201ENST00000261584 EEF2KO00418 725 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms