RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 FAM72CH0Y354 149 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 ACSL4O60488 711 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 ATP1A1P05023 1023 aaKnown RBP16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 RPS6KA1Q15418 735 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 MS4A13Q5J8X5 152 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 FAM72AQ5TYM5 149 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 FAM72DQ6L9T8 149 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 PARM1Q6UWI2 310 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 FAM72BQ86X60 149 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 PSTKQ8IV42 348 aaKnown RBP16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 BBS7Q8IWZ6 715 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 RAPGEF5Q92565 580 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 FGF14Q92915 247 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 AZIN2Q96A70 460 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 KCTD15Q96SI1 283 aaPredicted RBP16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 PHF7Q9BWX1 381 aaPredicted RBP16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 DHX35Q9H5Z1 703 aaKnown RBP16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 ZFP14Q9HCL3 533 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 STOML2Q9UJZ1 356 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 HEPACAM2A8MVW5 462 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 C2CD4DB7Z1M9 353 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 CD48P09326 243 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 IL9P15248 144 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 L1CAMP32004 1257 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 SLC11A2P49281 568 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 ARSEP51690 589 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 MLLT6P55198 1093 aaPredicted RBP16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 DPYSL2Q16555 572 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 FAM133BQ5BKY9 247 aaKnown RBP16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 ARTNQ5T4W7 220 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 RAP1GAP2Q684P5 730 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 SYT10Q6XYQ8 523 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 KATNAL2Q8IYT4 538 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 UBL4BQ8N7F7 174 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 PRMT1Q99873 361 aaKnown RBP16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 OSBPL2Q9H1P3 480 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 OBP2AQ9NY56 170 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 OR12D3Q9UGF7 316 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 DNAI1Q9UI46 699 aa16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCDC90B-201ENST00000260054 PI4K2BG5E9Z4 385 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 LATS1O95835 1130 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 KRT1P04264 644 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 SLC6A4P31645 630 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 RWDD2BP57060 319 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 SEMA3BQ13214 749 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 MTA1Q13330 715 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 PPP6R3Q5H9R7 873 aaPredicted RBP16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 ZFYVE27Q5T4F4 411 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 DCAF12L1Q5VU92 463 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 VITQ6UXI7 678 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 C14orf80Q86SX3 495 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 TDRD5Q8NAT2 981 aaKnown RBP16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 BPIFB1Q8TDL5 484 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 MYEOVQ96EZ4 313 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 C1orf74Q96LT6 269 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 PSMB7Q99436 277 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 KXD1Q9BQD3 176 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 PLA2G2FQ9BZM2 168 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 PCDH18Q9HCL0 1135 aa16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 DDX56Q9NY93 547 aaKnown RBP16.35■□□□□ 0.21
CCDC90B-201ENST00000260054 LRRD1A4D1F6 860 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 C3orf70A6NLC5 250 aaPredicted RBP16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 KDELR1P24390 212 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 CDH6P55285 790 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 AUHQ13825 339 aaKnown RBP16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 PUS10Q3MIT2 529 aaKnown RBP16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 ADGRF1Q5T601 910 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 RFWD3Q6PCD5 774 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 ANKS1BQ7Z6G8 1248 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 CHSY1Q86X52 802 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 FAM217AQ8IXS0 508 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 ZNF683Q8IZ20 524 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 KCTD6Q8NC69 237 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 FAM71BQ8TC56 605 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 RNF25Q96BH1 459 aaPredicted RBP16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 ELSPBP1Q96BH3 223 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 RPGRIP1Q96KN7 1286 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 NAPGQ99747 312 aaPredicted RBP16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 RPP25Q9BUL9 199 aaKnown RBP16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 LINC00597Q9H2U6 94 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 ZNF510Q9Y2H8 683 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 WNT6Q9Y6F9 365 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 ANHXE9PGG2 379 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 TRDMT1O14717 391 aaKnown RBP16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 CREB3O43889 395 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 ZNF500O60304 480 aaPredicted RBP16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 LRIG2O94898 1065 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 PYGMP11217 842 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 TACR2P21452 398 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 IL4RP24394 825 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 VCPP55072 806 aaKnown RBP16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 NRG1Q02297 640 aaPredicted RBP16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 MMRN1Q13201 1228 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 HTR4Q13639 388 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 DPYSL3Q14195 570 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 KRT81Q14533 505 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 MANEALQ5VSG8 457 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 FBXL22Q6P050 247 aa16.34■□□□□ 0.21
CCDC90B-201ENST00000260054 AADACL2Q6P093 401 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms