RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 VSIG1Q86XK7 387 aa18.1■□□□□ 0.49
SRSF1-201ENST00000258962 ATL2Q8NHH9 583 aa18.1■□□□□ 0.49
SRSF1-201ENST00000258962 SLC35B2Q8TB61 432 aa18.1■□□□□ 0.49
SRSF1-201ENST00000258962 FAF2Q96CS3 445 aa18.1■□□□□ 0.49
SRSF1-201ENST00000258962 PGAP3Q96FM1 320 aaPredicted RBP18.1■□□□□ 0.49
SRSF1-201ENST00000258962 GDAP1L1Q96MZ0 367 aa18.1■□□□□ 0.49
SRSF1-201ENST00000258962 RNF157Q96PX1 679 aa18.1■□□□□ 0.49
SRSF1-201ENST00000258962 KCTD15Q96SI1 283 aaPredicted RBP18.1■□□□□ 0.49
SRSF1-201ENST00000258962 FAM114A2Q9NRY5 505 aa18.1■□□□□ 0.49
SRSF1-201ENST00000258962 SAE1Q9UBE0 346 aaPredicted RBP18.1■□□□□ 0.49
SRSF1-201ENST00000258962 FAM153AQ9UHL3 310 aa18.1■□□□□ 0.49
SRSF1-201ENST00000258962 CLUHO75153 1309 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 ZNF487B1APH4 448 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 RPL21P46778 160 aaKnown RBP18.09■□□□□ 0.49
SRSF1-201ENST00000258962 ALDH1A3P47895 512 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 PGFP49763 221 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 DRG2P55039 364 aaKnown RBP18.09■□□□□ 0.49
SRSF1-201ENST00000258962 DEUP1Q05D60 604 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 IFRD2Q12894 506 aaPredicted RBP18.09■□□□□ 0.49
SRSF1-201ENST00000258962 GPS2Q13227 327 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 NME3Q13232 169 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 PLD1Q13393 1074 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 PTK6Q13882 451 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 OASLQ15646 514 aaKnown RBP18.09■□□□□ 0.49
SRSF1-201ENST00000258962 SND1Q7KZF4 910 aaKnown RBP eCLIP18.09■□□□□ 0.49
SRSF1-201ENST00000258962 BEND5Q7L4P6 421 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 SCD5Q86SK9 330 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 MAP7D3Q8IWC1 876 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 PLCD3Q8N3E9 789 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 TDRD5Q8NAT2 981 aaKnown RBP18.09■□□□□ 0.49
SRSF1-201ENST00000258962 ADAM32Q8TC27 787 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 GRK7Q8WTQ7 553 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 C2orf15Q8WU43 125 aaKnown RBP18.09■□□□□ 0.49
SRSF1-201ENST00000258962 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.09■□□□□ 0.49
SRSF1-201ENST00000258962 NKD2Q969F2 451 aaPredicted RBP18.09■□□□□ 0.49
SRSF1-201ENST00000258962 CAVIN3Q969G5 261 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 CCDC114Q96M63 670 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 ZNF512Q96ME7 567 aaPredicted RBP18.09■□□□□ 0.49
SRSF1-201ENST00000258962 ZNF670Q9BS34 389 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 DHX35Q9H5Z1 703 aaKnown RBP18.09■□□□□ 0.49
SRSF1-201ENST00000258962 TMPRSS4Q9NRS4 437 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 GRHL1Q9NZI5 618 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 SLC27A5Q9Y2P5 690 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 SNX24Q9Y343 169 aa18.09■□□□□ 0.49
SRSF1-201ENST00000258962 SYNJ2BP-COX16A0A087WUM0 186 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 SOAT2O75908 522 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 PECAM1P16284 738 aaPredicted RBP18.08■□□□□ 0.49
SRSF1-201ENST00000258962 PTPN2P17706 415 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 GBP2P32456 591 aaPredicted RBP18.08■□□□□ 0.49
SRSF1-201ENST00000258962 TNNT3P45378 269 aaPredicted RBP18.08■□□□□ 0.49
SRSF1-201ENST00000258962 TUFMP49411 452 aaKnown RBP18.08■□□□□ 0.49
SRSF1-201ENST00000258962 EPHB3P54753 998 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 VCPP55072 806 aaKnown RBP18.08■□□□□ 0.49
SRSF1-201ENST00000258962 YWHAGP61981 247 aaKnown RBP eCLIP18.08■□□□□ 0.49
SRSF1-201ENST00000258962 OTUD4Q01804 1114 aaKnown RBP18.08■□□□□ 0.49
SRSF1-201ENST00000258962 TWF1Q12792 350 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 BYSLQ13895 437 aaKnown RBP18.08■□□□□ 0.49
SRSF1-201ENST00000258962 HLTFQ14527 1009 aaKnown RBP eCLIP18.08■□□□□ 0.49
SRSF1-201ENST00000258962 CASP8Q14790 479 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 ANKRD20A8PQ5CZ79 823 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 ZDHHC24Q6UX98 284 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 SYDE1Q6ZW31 735 aaPredicted RBP18.08■□□□□ 0.49
SRSF1-201ENST00000258962 PQLC3Q8N755 202 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 PCDH19Q8TAB3 1148 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 ACTL9Q8TC94 416 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 SPPL2BQ8TCT7 592 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 ZDHHC18Q9NUE0 388 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 RRN3Q9NYV6 651 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 COX16Q9P0S2 106 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 HSFX1Q9UBD0 423 aa18.08■□□□□ 0.49
SRSF1-201ENST00000258962 APOC4-APOC2K7ER74 178 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 APOC2P02655 101 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 HAPLN1P10915 354 aaPredicted RBP18.08■□□□□ 0.48
SRSF1-201ENST00000258962 FSHRP23945 695 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 USP46P62068 366 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 NNTQ13423 1086 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 TFDP2Q14188 446 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 PPP1R7Q15435 360 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 PPP6R3Q5H9R7 873 aaPredicted RBP18.08■□□□□ 0.48
SRSF1-201ENST00000258962 TAC4Q86UU9 113 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 PSTKQ8IV42 348 aaKnown RBP18.08■□□□□ 0.48
SRSF1-201ENST00000258962 NUP93Q8N1F7 819 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 PYROXD2Q8N2H3 581 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 TTC13Q8NBP0 860 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 DQX1Q8TE96 717 aaKnown RBP18.08■□□□□ 0.48
SRSF1-201ENST00000258962 NMUR1Q9HB89 426 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 ANLNQ9NQW6 1124 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.08■□□□□ 0.481e-20■□□□□ 10.6
SRSF1-201ENST00000258962 IL37Q9NZH6 218 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 SCML2Q9UQR0 700 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 DRG1Q9Y295 367 aaKnown RBP18.08■□□□□ 0.48
SRSF1-201ENST00000258962 YIPF1Q9Y548 306 aa18.08■□□□□ 0.48
SRSF1-201ENST00000258962 C2CD4DB7Z1M9 353 aa18.07■□□□□ 0.48
SRSF1-201ENST00000258962 I6L893 689 aaPredicted RBP18.07■□□□□ 0.48
SRSF1-201ENST00000258962 GAS8O95995 478 aa18.07■□□□□ 0.48
SRSF1-201ENST00000258962 IGLV3-25P01717 112 aa18.07■□□□□ 0.48
SRSF1-201ENST00000258962 NTHL1P78549 312 aa18.07■□□□□ 0.48
SRSF1-201ENST00000258962 MGAT5BQ3V5L5 792 aa18.07■□□□□ 0.48
SRSF1-201ENST00000258962 PABPC1LQ4VXU2 614 aaKnown RBP18.07■□□□□ 0.48
SRSF1-201ENST00000258962 SLC9A4Q6AI14 798 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms