RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 NOVA2Q9UNW9 492 aaKnown RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 GDAQ9Y2T3 454 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 MYH7BA7E2Y1 1941 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 MTMR11A4FU01 709 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 ITM2AO43736 263 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 NUAK1O60285 661 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 SCO1O75880 301 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 GJB6O95452 261 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 KRT8P05787 483 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 ANXA8P13928 327 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 EPHB2P29323 1055 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 MAGOHP61326 146 aaKnown RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 ALDH6A1Q02252 535 aaKnown RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 NAB1Q13506 487 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 OXA1LQ15070 435 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 BEND3Q5T5X7 828 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 ATAD3BQ5T9A4 648 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 ANXA8L1Q5VT79 327 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 STXBP4Q6ZWJ1 553 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 GSTA5Q7RTV2 222 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 LRRC6Q86X45 466 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 ZNF354CQ86Y25 554 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 KLHL36Q8N4N3 616 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 SNX31Q8N9S9 440 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 DNAJB8Q8NHS0 232 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 ADAM32Q8TC27 787 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 CABLES1Q8TDN4 633 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 DDX1Q92499 740 aaKnown RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 MAGOHBQ96A72 148 aaKnown RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 TEKT5Q96M29 485 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 ACPTQ9BZG2 426 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 DCLK3Q9C098 648 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 C6orf62Q9GZU0 229 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 ANKRD2Q9GZV1 360 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 EBF3Q9H4W6 596 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 RC3H2Q9HBD1 1191 aaKnown RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 MAT2BQ9NZL9 334 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 SLC24A2Q9UI40 661 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 ANKRD6Q9Y2G4 727 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 ARL2BPQ9Y2Y0 163 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 SNX13Q9Y5W8 968 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 SLC22A7Q9Y694 548 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 CEPT1Q9Y6K0 416 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 A0A0A6YYJ9 748 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 SLCO1B7G3V0H7 640 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 H3BSA7 217 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 KRT1P04264 644 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 ASGR1P07306 291 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 SLC3A2P08195 630 aaKnown RBP7.94□□□□□ -1.14
GPNMB-201ENST00000258733 MARK3P27448 753 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 PAFAH1B1P43034 410 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 DSC2Q02487 901 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 BTKQ06187 659 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 TLR1Q15399 786 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 TSC22D1Q15714 1073 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 HADHQ16836 314 aaKnown RBP7.94□□□□□ -1.14
GPNMB-201ENST00000258733 GTDC1Q4AE62 458 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 HP1BP3Q5SSJ5 553 aaPredicted RBP7.94□□□□□ -1.14
GPNMB-201ENST00000258733 HES5Q5TA89 166 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 MIB1Q86YT6 1006 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 DTX3LQ8TDB6 740 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 FIG4Q92562 907 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 STMN2Q93045 179 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 MTFMTQ96DP5 389 aaKnown RBP7.94□□□□□ -1.14
GPNMB-201ENST00000258733 DSCC1Q9BVC3 393 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 MRPS26Q9BYN8 205 aaKnown RBP7.94□□□□□ -1.14
GPNMB-201ENST00000258733 TTYH3Q9C0H2 523 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 DHX33Q9H6R0 707 aaKnown RBP7.94□□□□□ -1.14
GPNMB-201ENST00000258733 CAPN10Q9HC96 672 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 AGPAT3Q9NRZ7 376 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 HOMER2Q9NSB8 354 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 PLK2Q9NYY3 685 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 AGO1Q9UL18 857 aaKnown RBP7.94□□□□□ -1.14
GPNMB-201ENST00000258733 B3GNT3Q9Y2A9 372 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 STXBP5LQ9Y2K9 1186 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 ACOT9Q9Y305 439 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 PTCH2Q9Y6C5 1203 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 CDC42BPGQ6DT37 1551 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 EVPLLA8MZ36 301 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 AP3D1O14617 1153 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 GNB5O14775 395 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 SPOPO43791 374 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 CHRNA1P02708 482 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 FAM153BP0C7A2 387 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 SLC2A3P11169 496 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 SRCP12931 536 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 SDSP20132 328 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 RASSF2P50749 326 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 CDK9P50750 372 aaKnown RBP7.94□□□□□ -1.14
GPNMB-201ENST00000258733 TKTL1P51854 596 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 KRT81Q14533 505 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 CLCA4Q14CN2 919 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 TARBP2Q15633 366 aaKnown RBP7.94□□□□□ -1.14
GPNMB-201ENST00000258733 AANATQ16613 207 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 DGKDQ16760 1214 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 FAM153CQ494X1 144 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 MMEL1Q495T6 779 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 BRMS1LQ5PSV4 323 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 PPM1LQ5SGD2 360 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms