RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ZCCHC2Q9C0B9 1178 aaKnown RBP8.92□□□□□ -0.98
PTCD3-201ENST00000254630 ELOVL6Q9H5J4 265 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 SLC24A3Q9HC58 644 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 RGS18Q9NS28 235 aa8.92□□□□□ -0.98
PTCD3-201ENST00000254630 NFICP08651 508 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 AMPD1P23109 780 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 VHLP40337 213 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 PWP1Q13610 501 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 ALFQ53S48 1182 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 CDKAL1Q5VV42 579 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 LLGL2Q6P1M3 1020 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 ZPBP2Q6X784 338 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 TMEM199Q8N511 208 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 ANKRD49Q8WVL7 239 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 INPP5DQ92835 1189 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 CATSPER2Q96P56 530 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 SMAD5Q99717 465 aaKnown RBP8.91□□□□□ -0.98
PTCD3-201ENST00000254630 NAT9Q9BTE0 207 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 OSBPL10Q9BXB5 764 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 TKTL2Q9H0I9 626 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 ARMC7Q9H6L4 198 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 POPDC2Q9HBU9 364 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 SLC40A1Q9NP59 571 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 EXOSC4Q9NPD3 245 aaKnown RBP8.91□□□□□ -0.98
PTCD3-201ENST00000254630 DDX28Q9NUL7 540 aaKnown RBP8.91□□□□□ -0.98
PTCD3-201ENST00000254630 MSRAQ9UJ68 235 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 GTF2A1LQ9UNN4 478 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 CARNS1A5YM72 827 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 LTFP02788 710 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 PSMA3P25788 255 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 GRK4P32298 578 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 BCL2L1Q07817 233 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 PRKAA1Q13131 559 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 NAB1Q13506 487 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 ICE2Q659A1 982 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 ILDR2Q71H61 639 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 CYP2W1Q8TAV3 490 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 ADAM32Q8TC27 787 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 MRPL48Q96GC5 212 aaKnown RBP8.91□□□□□ -0.98
PTCD3-201ENST00000254630 VMP1Q96GC9 406 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 PPP1R16AQ96I34 528 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 UBA2Q9UBT2 640 aaPredicted RBP8.91□□□□□ -0.98
PTCD3-201ENST00000254630 SERPINF2P08697 491 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 AQP5P55064 265 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 CASP7P55210 303 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 ZCCHC8Q6NZY4 707 aaKnown RBP8.91□□□□□ -0.98
PTCD3-201ENST00000254630 FAM180AQ6UWF9 173 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 SCUBE3Q8IX30 993 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 USP7Q93009 1102 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 POMKQ9H5K3 350 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 EFCAB1Q9HAE3 211 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 NMRAL1Q9HBL8 299 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 UBR1Q8IWV7 1749 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 CES2O00748 559 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 ABCB1P08183 1280 aaPredicted RBP8.91□□□□□ -0.98
PTCD3-201ENST00000254630 ZNF23P17027 643 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 SCARA3Q6AZY7 606 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 USP45Q70EL2 814 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 SRLQ86TD4 932 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 MAP4K3Q8IVH8 894 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 DEFB106AQ8N104 65 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 ADAM2Q99965 735 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 C1QTNF7Q9BXJ2 289 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 COMMD8Q9NX08 183 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 SMPD4Q9NXE4 827 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 AHSPQ9NZD4 102 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 ACOT9Q9Y305 439 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 ZMYM2Q9UBW7 1377 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 ERI2A8K979 691 aaKnown RBP8.91□□□□□ -0.98
PTCD3-201ENST00000254630 RARGP13631 454 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 BMPR2Q13873 1038 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 PKN2Q16513 984 aaKnown RBP8.91□□□□□ -0.98
PTCD3-201ENST00000254630 DNAAF5Q86Y56 855 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 SCUBE1Q8IWY4 988 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 CYP4Z2PQ8N1L4 340 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 PORCNQ9H237 461 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 FAM198AQ9UFP1 575 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 HAO1Q9UJM8 370 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 PCDHA11Q9Y5I1 949 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 YBX3P16989 372 aaKnown RBP eCLIP8.91□□□□□ -0.983e-8■□□□□ 9.5
PTCD3-201ENST00000254630 GTF2E2P29084 291 aaKnown RBP8.91□□□□□ -0.98
PTCD3-201ENST00000254630 TUFMP49411 452 aaKnown RBP8.91□□□□□ -0.98
PTCD3-201ENST00000254630 KCNMA1Q12791 1236 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 NFIL3Q16649 462 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 CXorf40AQ8TE69 158 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 TMEM159Q96B96 161 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 SH3GL1Q99961 368 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 CATSPERZQ9NTU4 200 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 TMEM51Q9NW97 253 aa8.91□□□□□ -0.98
PTCD3-201ENST00000254630 NRCAMQ92823 1304 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 RICTORQ6R327 1708 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 E9PBE3 544 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 O00370 1275 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 KLHL41O60662 606 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 NDUFS2O75306 463 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 FMO4P31512 558 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 HPCAL1P37235 193 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 GUCA1AP43080 201 aaPredicted RBP8.9□□□□□ -0.98
PTCD3-201ENST00000254630 MMP13P45452 471 aa8.9□□□□□ -0.98
PTCD3-201ENST00000254630 CLK1P49759 484 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms