RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ST3GAL1Q11201 340 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 GJC2Q5T442 439 aaPredicted RBP19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 DEFB107AQ8IZN7 70 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 TCP10LQ8TDR4 215 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 CASP10Q92851 521 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 NACC2Q96BF6 587 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 SPACA6W5XKT8 324 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 VAC14Q08AM6 782 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 NCKIPSDQ9NZQ3 722 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 A0A0U1RQJ8 604 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 RIPK2O43353 540 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 WBP4O75554 376 aaKnown RBP19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 PGK1P00558 417 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 SCNN1GP51170 649 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 TMEM237Q96Q45 408 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 FRMD8P1Q9BZ68 369 aaPredicted RBP19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 ANKZF1Q9H8Y5 726 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 IPPQ9Y573 584 aa19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 ZC3H13Q5T200 1668 aaKnown RBP19.13■□□□□ 0.65
SMARCC1-201ENST00000254480 IFI35P80217 286 aaPredicted RBP19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 DET1Q7L5Y6 550 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 ILDR1Q86SU0 546 aaPredicted RBP19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 CCDC126Q96EE4 140 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 TBC1D13Q9NVG8 400 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 ARMCX1Q9P291 453 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 KPNA3O00505 521 aaPredicted RBP19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 PIAS1O75925 651 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 TNNI3P19429 210 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 EVX2Q03828 476 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 KBTBD12Q3ZCT8 623 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 TPD52L3Q96J77 140 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 ULBP1Q9BZM6 244 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 CD151P48509 253 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 C1QBPQ07021 282 aaKnown RBP19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 TRIP4Q15650 581 aaPredicted RBP19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 DACT2Q5SW24 774 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 CCNJLQ8IV13 435 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 ATG16L2Q8NAA4 619 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 GLMNQ92990 594 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 FAM84AQ96KN4 292 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 KCTD14Q9BQ13 255 aaPredicted RBP19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 RNF208Q9H0X6 261 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 MID1IP1Q9NPA3 183 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 SOX13Q9UN79 622 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 HNRNPRO43390 633 aaKnown RBP19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 RBL1P28749 1068 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 C16orf46Q6P387 395 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 KCNT2Q6UVM3 1135 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 FAM83AQ86UY5 434 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 CHST7Q9NS84 486 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 UBXN8O00124 270 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 IFRD1O00458 451 aaPredicted RBP19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 RRM2P31350 389 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 OTUD3Q5T2D3 398 aaPredicted RBP19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 HNRNPLLQ8WVV9 542 aaKnown RBP19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 LPPQ93052 612 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 ZBTB10Q96DT7 871 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 BLOC1S4Q9NUP1 217 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 RPS6KB2Q9UBS0 482 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 TMCC3Q9ULS5 477 aa19.12■□□□□ 0.65
SMARCC1-201ENST00000254480 UBDO15205 165 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 RBP1P09455 135 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 MCL1Q07820 350 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 PKN2Q16513 984 aaKnown RBP19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 SLC35C1Q96A29 364 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 PTENP60484 403 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 CSTF3Q12996 717 aaKnown RBP19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 MARK2Q7KZI7 788 aaKnown RBP19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 FNDC5Q8NAU1 212 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 GRIN3AQ8TCU5 1115 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 FAM120BQ96EK7 910 aaKnown RBP19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 PARVBQ9HBI1 364 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 NDOR1Q9UHB4 597 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 FAM50BQ9Y247 325 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 LGALS2P05162 132 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 AKR1A1P14550 325 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 FIGNQ5HY92 759 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 MTSS1LQ765P7 747 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 KIAA0319LQ8IZA0 1049 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 UTP15Q8TED0 518 aaKnown RBP19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 MTERF3Q96E29 417 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 TBC1D23Q9NUY8 699 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 DIP2BQ9P265 1576 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 TPBGLP0DKB5 382 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 SARSP49591 514 aaKnown RBP19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 DDR1Q08345 913 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 WSCD1Q658N2 575 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 WDR59Q6PJI9 974 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 PCDH9Q9HC56 1237 aa19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 DMAP1Q9NPF5 467 aaPredicted RBP19.11■□□□□ 0.65
SMARCC1-201ENST00000254480 PHGDHO43175 533 aaKnown RBP19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 TMEM119Q4V9L6 283 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 FGD2Q7Z6J4 655 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 ITIH5Q86UX2 942 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 ABHD16BQ9H3Z7 469 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 A0A0A6YYK5 440 aaPredicted RBP19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 ACKR2O00590 384 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 SGCGQ13326 291 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 CRYMQ14894 314 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 FNDC3BQ53EP0 1204 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms