RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 LRATO95237 230 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 RPA1P27694 616 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 PPARGP37231 505 aaPredicted RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 CYP24A1Q07973 514 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 C19orf18Q8NEA5 215 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 TSPAN14Q8NG11 270 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 LRRC4BQ9NT99 713 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 PRG3Q9Y2Y8 225 aaPredicted RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 FAM149AA5PLN7 773 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 EML1O00423 815 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 ERMARDQ5T6L9 678 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 DET1Q7L5Y6 550 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 SDR42E2A6NKP2 422 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 COX4I1P13073 169 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 ALDH9A1P49189 494 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 HPS6Q86YV9 775 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 STX19Q8N4C7 294 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 RRN3Q9NYV6 651 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 OVOS2A0A0G2JMS6 1433 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 DYNC1LI2O43237 492 aaPredicted RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 PLA2G6O60733 806 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 IFI30P13284 250 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 AKAP5P24588 427 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 SFNP31947 248 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 CCDC157Q569K6 752 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 EPHX4Q8IUS5 362 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 MCOLN2Q8IZK6 566 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 TSPAN17Q96FV3 270 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 PCDHAC2Q9Y5I4 1007 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 TRDMT1O14717 391 aaKnown RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 PRIM2P49643 509 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 AKR1D1P51857 326 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 DCDC2Q9UHG0 476 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 CITO14578 2027 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 CAPN8A6NHC0 703 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 SLC5A9Q2M3M2 681 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 SATL1Q86VE3 508 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.69□□□□□ -1.18
RIF1-201ENST00000243326 ANKRD49Q8WVL7 239 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 TMLHEQ9NVH6 421 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 NKX1-2Q9UD57 310 aaPredicted RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 ZNF212Q9UDV6 495 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 A8MV72 311 aaPredicted RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 NRG1Q02297 640 aaPredicted RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 CHRNB3Q05901 458 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 FASTKD3Q14CZ7 662 aaKnown RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 FGD3Q5JSP0 725 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 CENPPQ6IPU0 288 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 IDH3BO43837 385 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 SNX3O60493 162 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 CLASP2O75122 1294 aaKnown RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 FASP25445 335 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 FMO4P31512 558 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 SEPHS1P49903 392 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 MAP3K10Q02779 954 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 GRIK5Q16478 980 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 PITRM1Q5JRX3 1037 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 CWF19L1Q69YN2 538 aaKnown RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 C16orf59Q7L2K0 433 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 TINF2Q9BSI4 451 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 TCF7L2Q9NQB0 619 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 SLC17A6Q9P2U8 582 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 R3HDM2Q9Y2K5 976 aaKnown RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 MRPS7Q9Y2R9 242 aaKnown RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 SPTBP11277 2137 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 FFAR3O14843 346 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 GPR42O15529 346 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 TNFAIP8O95379 198 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 MGAT5BQ3V5L5 792 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 KRT84Q9NSB2 600 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 BLOC1S4Q9NUP1 217 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 ST13P50502 369 aaKnown RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 IRGCQ6NXR0 463 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 LPCAT1Q8NF37 534 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 VMP1Q96GC9 406 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 TELO2Q9Y4R8 837 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 KPNA4O00629 521 aaPredicted RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 GSNP06396 782 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 CHRM5P08912 532 aaPredicted RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 LINC00032P0C843 101 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 GRIA3P42263 894 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 BCAT1P54687 386 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 CCNIQ14094 377 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 NR6A1Q15406 480 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 BPIFA1Q9NP55 256 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 EURLQ9NYK6 297 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 ZNF222Q9UK12 451 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 TRPC5OSA6NMA1 111 aa7.68□□□□□ -1.18
RIF1-201ENST00000243326 CCT3P49368 545 aaKnown RBP7.68□□□□□ -1.18
RIF1-201ENST00000243326 MTTPP55157 894 aa7.68□□□□□ -1.18
RIF1-201ENST00000243326 TTLL4Q14679 1199 aa7.68□□□□□ -1.18
RIF1-201ENST00000243326 EDRF1Q3B7T1 1238 aa7.68□□□□□ -1.18
RIF1-201ENST00000243326 POM121L1PQ3SYA9 428 aa7.68□□□□□ -1.18
RIF1-201ENST00000243326 ARMCX4Q5H9R4 360 aa7.68□□□□□ -1.18
RIF1-201ENST00000243326 CMC1Q7Z7K0 106 aa7.68□□□□□ -1.18
RIF1-201ENST00000243326 CRLS1Q9UJA2 301 aa7.68□□□□□ -1.18
RIF1-201ENST00000243326 U3KQV3 271 aa7.68□□□□□ -1.18
RIF1-201ENST00000243326 MICAL2O94851 1124 aa7.68□□□□□ -1.18
RIF1-201ENST00000243326 VAV1P15498 845 aa7.68□□□□□ -1.18
RIF1-201ENST00000243326 ACO1P21399 889 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms