RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 PRPF4O43172 522 aaKnown RBP eCLIP19.07■□□□□ 0.64
HOXC11-201ENST00000243082 NBNO60934 754 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 SPAG6O75602 509 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 SLC5A3P53794 718 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 TPI1P60174 286 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 EIF4EBP2Q13542 120 aaPredicted RBP19.07■□□□□ 0.64
HOXC11-201ENST00000243082 DENND5BQ6ZUT9 1274 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 DENND1AQ8TEH3 1009 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 MZB1Q8WU39 189 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 ZNF296Q8WUU4 475 aaPredicted RBP19.07■□□□□ 0.64
HOXC11-201ENST00000243082 TMEM161AQ9NX61 479 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 NKIRAS1Q9NYS0 192 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 PRG3Q9Y2Y8 225 aaPredicted RBP19.07■□□□□ 0.64
HOXC11-201ENST00000243082 SNX10Q9Y5X0 201 aa19.07■□□□□ 0.64
HOXC11-201ENST00000243082 RNF103O00237 685 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 SPAG7O75391 227 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 IGLV3-25P01717 112 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 C1QAP02745 245 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 FDFT1P37268 417 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 GRIK1P39086 918 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 GRIA1P42261 906 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 MSH2P43246 934 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 APLP1P51693 650 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 WASHC5Q12768 1159 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 SLC39A12Q504Y0 691 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 GKAP1Q5VSY0 366 aaPredicted RBP19.06■□□□□ 0.64
HOXC11-201ENST00000243082 COLGALT1Q8NBJ5 622 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 CCNYQ8ND76 341 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 GDAP1Q8TB36 358 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 LRRC39Q96DD0 335 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 SIGLEC10Q96LC7 697 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 ZCWPW1Q9H0M4 648 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 PATJQ8NI35 1801 aa19.06■□□□□ 0.64
HOXC11-201ENST00000243082 ENPP3O14638 875 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 PPP1R12AO14974 1030 aaPredicted RBP19.05■□□□□ 0.64
HOXC11-201ENST00000243082 FKTNO75072 461 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 VIMP08670 466 aaKnown RBP19.05■□□□□ 0.64
HOXC11-201ENST00000243082 PGFP49763 221 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 VEGFBP49765 207 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 SLC18A1P54219 525 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 WDR4P57081 412 aaKnown RBP19.05■□□□□ 0.64
HOXC11-201ENST00000243082 KBTBD12Q3ZCT8 623 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 MICALCLQ6ZW33 695 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 PIGWQ7Z7B1 504 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 PRPF39Q86UA1 669 aaKnown RBP19.05■□□□□ 0.64
HOXC11-201ENST00000243082 TAX1BP1Q86VP1 789 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 C4orf33Q8N1A6 199 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 CFAP36Q96G28 342 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 SMC6Q96SB8 1091 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 OR12D3Q9UGF7 316 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 ZC3H7BQ9UGR2 993 aaKnown RBP19.05■□□□□ 0.64
HOXC11-201ENST00000243082 TTLL3Q9Y4R7 772 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 OPHN1O60890 802 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 COL6A1P12109 1028 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 NPWQ8N729 165 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 DBF4BQ8NFT6 615 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 SLC44A1Q8WWI5 657 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 SGSM3Q96HU1 749 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 TRIM62Q9BVG3 475 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 CEP41Q9BYV8 373 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 RAD54BQ9Y620 910 aa19.05■□□□□ 0.64
HOXC11-201ENST00000243082 ATXN2Q99700 1313 aaKnown RBP19.04■□□□□ 0.64
HOXC11-201ENST00000243082 TCP11X1B4DZS4 312 aa19.04■□□□□ 0.64
HOXC11-201ENST00000243082 TYROBPO43914 113 aa19.04■□□□□ 0.64
HOXC11-201ENST00000243082 STK10O94804 968 aaKnown RBP19.04■□□□□ 0.64
HOXC11-201ENST00000243082 STX2P32856 288 aa19.04■□□□□ 0.64
HOXC11-201ENST00000243082 ZNF135P52742 658 aaPredicted RBP19.04■□□□□ 0.64
HOXC11-201ENST00000243082 CORO7P57737 925 aa19.04■□□□□ 0.64
HOXC11-201ENST00000243082 IFRD2Q12894 506 aaPredicted RBP19.04■□□□□ 0.64
HOXC11-201ENST00000243082 PDZD4Q76G19 769 aaPredicted RBP19.04■□□□□ 0.64
HOXC11-201ENST00000243082 SCD5Q86SK9 330 aa19.04■□□□□ 0.64
HOXC11-201ENST00000243082 FAM126BQ8IXS8 530 aa19.04■□□□□ 0.64
HOXC11-201ENST00000243082 CACNA2D3Q8IZS8 1091 aa19.04■□□□□ 0.64
HOXC11-201ENST00000243082 ZNF567Q8N184 647 aa19.04■□□□□ 0.64
HOXC11-201ENST00000243082 MPP5Q8N3R9 675 aa19.04■□□□□ 0.64
HOXC11-201ENST00000243082 FAM193BQ96PV7 902 aaPredicted RBP19.04■□□□□ 0.64
HOXC11-201ENST00000243082 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.04■□□□□ 0.64
HOXC11-201ENST00000243082 ELAC1Q9H777 363 aaKnown RBP19.04■□□□□ 0.64
HOXC11-201ENST00000243082 XAB2Q9HCS7 855 aaKnown RBP19.04■□□□□ 0.64
HOXC11-201ENST00000243082 ABCC13Q9NSE7 274 aa19.04■□□□□ 0.64
HOXC11-201ENST00000243082 SMG5Q9UPR3 1016 aaKnown RBP19.04■□□□□ 0.64
HOXC11-201ENST00000243082 F5H423 210 aaPredicted RBP19.03■□□□□ 0.64
HOXC11-201ENST00000243082 LRIG2O94898 1065 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 ASMTLO95671 621 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 PLEKHG4Q58EX7 1191 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 DCP1BQ8IZD4 617 aaKnown RBP19.03■□□□□ 0.64
HOXC11-201ENST00000243082 EPAS1Q99814 870 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 FERMT1Q9BQL6 677 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 SEPT10Q9P0V9 454 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 MYO1CO00159 1063 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 TRDMT1O14717 391 aaKnown RBP19.03■□□□□ 0.64
HOXC11-201ENST00000243082 IRAK2O43187 625 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 TADA2AO75478 443 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 KRT4P19013 534 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 PRMT2P55345 433 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 CDK16Q00536 496 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 IFT88Q13099 833 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 PARP6Q2NL67 630 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 BTBD8Q5XKL5 378 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 UNC5AQ6ZN44 842 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms