RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 RARGP13631 454 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 COILP38432 576 aaPredicted RBP8.3□□□□□ -1.08
CXCR4-201ENST00000241393 MECP2P51608 486 aaKnown RBP8.3□□□□□ -1.08
CXCR4-201ENST00000241393 ADCY2Q08462 1091 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 PSMD6Q15008 389 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 SIX1Q15475 284 aaPredicted RBP8.3□□□□□ -1.08
CXCR4-201ENST00000241393 TIGD5Q53EQ6 642 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 XKR3Q5GH77 459 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 ADGRF1Q5T601 910 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 DENND2CQ68D51 928 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 SLFN12LQ6IEE8 588 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 MIS18BP1Q6P0N0 1132 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 CCDC137Q6PK04 289 aaKnown RBP8.3□□□□□ -1.08
CXCR4-201ENST00000241393 TAS1R2Q8TE23 839 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 PSPC1Q8WXF1 523 aaKnown RBP8.3□□□□□ -1.08
CXCR4-201ENST00000241393 GLG1Q92896 1179 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 CCDC127Q96BQ5 260 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 SAAL1Q96ER3 474 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 VCPIP1Q96JH7 1222 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 YIPF4Q9BSR8 244 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 EPB41L4BQ9H329 900 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 HOMER3Q9NSC5 361 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 C1orf112Q9NSG2 853 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 SLC9A2Q9UBY0 812 aa8.3□□□□□ -1.08
CXCR4-201ENST00000241393 ARID2Q68CP9 1835 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 TMEM150BA6NC51 233 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 HNRNPDLO14979 420 aaKnown RBP8.29□□□□□ -1.08
CXCR4-201ENST00000241393 ULK1O75385 1050 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 LDHAP00338 332 aaKnown RBP8.29□□□□□ -1.08
CXCR4-201ENST00000241393 AGTP01019 485 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 UNGP13051 313 aaPredicted RBP8.29□□□□□ -1.08
CXCR4-201ENST00000241393 HPDP32754 393 aaPredicted RBP8.29□□□□□ -1.08
CXCR4-201ENST00000241393 ICAM3P32942 547 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 MARCKSL1P49006 195 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 PLTPP55058 493 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 CAV1Q03135 178 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 SEPT7Q16181 437 aaKnown RBP8.29□□□□□ -1.08
CXCR4-201ENST00000241393 ZACNQ401N2 412 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 TTC31Q49AM3 519 aaPredicted RBP8.29□□□□□ -1.08
CXCR4-201ENST00000241393 ODF2Q5BJF6 829 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 TTC19Q6DKK2 380 aaPredicted RBP8.29□□□□□ -1.08
CXCR4-201ENST00000241393 ABHD15Q6UXT9 468 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 TRMT10CQ7L0Y3 403 aaKnown RBP8.29□□□□□ -1.08
CXCR4-201ENST00000241393 ZSWIM9Q86XI8 627 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 FBXO25Q8TCJ0 367 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 P3H4Q92791 437 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 ART4Q93070 314 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 C18orf8Q96DM3 657 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 TEX13BQ9BXU2 312 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 ROPN1BQ9BZX4 212 aaPredicted RBP8.29□□□□□ -1.08
CXCR4-201ENST00000241393 CENPHQ9H3R5 247 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 ROPN1Q9HAT0 212 aaPredicted RBP8.29□□□□□ -1.08
CXCR4-201ENST00000241393 NGRNQ9NPE2 291 aaKnown RBP8.29□□□□□ -1.08
CXCR4-201ENST00000241393 XPNPEP1Q9NQW7 623 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 CNOT8Q9UFF9 292 aaKnown RBP8.29□□□□□ -1.08
CXCR4-201ENST00000241393 SNX24Q9Y343 169 aa8.29□□□□□ -1.08
CXCR4-201ENST00000241393 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.29□□□□□ -1.08
CXCR4-201ENST00000241393 TMEM110-MUSTN1A8MSY1 372 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 E7EVH7 732 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 HRKO00198 91 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 CLASP2O75122 1294 aaKnown RBP8.28□□□□□ -1.08
CXCR4-201ENST00000241393 FSBPO95073 299 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 CYP1A1P04798 512 aaPredicted RBP8.28□□□□□ -1.08
CXCR4-201ENST00000241393 SUPT20HL2P0C7V6 817 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 BPIP17213 487 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 MAPK4P31152 587 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 RPL21P46778 160 aaKnown RBP8.28□□□□□ -1.08
CXCR4-201ENST00000241393 MAPKAPK2P49137 400 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 ACTR2P61160 394 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 MAGOHP61326 146 aaKnown RBP8.28□□□□□ -1.08
CXCR4-201ENST00000241393 IRF9Q00978 393 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 PRKCEQ02156 737 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 DSG1Q02413 1049 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 PLCB4Q15147 1175 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 SUPT20HL1Q3ZLR7 823 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 SNRNP48Q6IEG0 339 aaKnown RBP8.28□□□□□ -1.08
CXCR4-201ENST00000241393 MFSD5Q6N075 450 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 TTC27Q6P3X3 843 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 C6orf89Q6UWU4 347 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 TAX1BP1Q86VP1 789 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 PTRH1Q86Y79 214 aaKnown RBP8.28□□□□□ -1.08
CXCR4-201ENST00000241393 CCDC105Q8IYK2 499 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 MCOLN2Q8IZK6 566 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 ZDHHC14Q8IZN3 488 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 OTUD6BQ8N6M0 293 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 EFHBQ8N7U6 833 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 SMC1BQ8NDV3 1235 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 GRK7Q8WTQ7 553 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 KIFC3Q9BVG8 833 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 TRIM31Q9BZY9 425 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 ACAD9Q9H845 621 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 ACSS2Q9NR19 701 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 CNTN6Q9UQ52 1028 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 RLFQ13129 1914 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 ADGRA3Q8IWK6 1321 aa8.28□□□□□ -1.08
CXCR4-201ENST00000241393 PHIPQ8WWQ0 1821 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 PSTPIP1O43586 416 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 FKBP9O95302 570 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 C4BPAP04003 597 aaKnown RBP8.27□□□□□ -1.08
CXCR4-201ENST00000241393 KRT5P13647 590 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms