RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 CHD1O14646 1710 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 MAST1Q9Y2H9 1570 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 TEX28O15482 410 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 PSIP1O75475 530 aaKnown RBP14.16□□□□□ -0.14
TARDBP-201ENST00000240185 HARS2P49590 506 aaKnown RBP14.16□□□□□ -0.14
TARDBP-201ENST00000240185 PCDH20Q8N6Y1 951 aaKnown RBP14.16□□□□□ -0.14
TARDBP-201ENST00000240185 HDAC7Q8WUI4 952 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 HPDLQ96IR7 371 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 SIK3Q9Y2K2 1263 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 STARD13Q9Y3M8 1113 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 TADA2AO75478 443 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 KRT36O76013 467 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 ZNF37AP17032 561 aaPredicted RBP14.16□□□□□ -0.14
TARDBP-201ENST00000240185 ADRA1DP25100 572 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 CBWD2Q8IUF1 395 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 LRRN4CLQ8ND94 238 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 BORCS5Q969J3 196 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 L3MBTL3Q96JM7 780 aaPredicted RBP14.16□□□□□ -0.14
TARDBP-201ENST00000240185 PCDH9Q9HC56 1237 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 AGPAT3Q9NRZ7 376 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 GPATCH2LQ9NWQ4 482 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 ARHGAP28Q9P2N2 729 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 ZNF180Q9UJW8 692 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 DYRK1BQ9Y463 629 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 KDM5AP29375 1690 aaKnown RBP14.16□□□□□ -0.14
TARDBP-201ENST00000240185 A0A0A6YYK5 440 aaPredicted RBP14.16□□□□□ -0.14
TARDBP-201ENST00000240185 AGRPO00253 132 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 RPS6KA5O75582 802 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 LRPAP1P30533 357 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 AP1S2P56377 157 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 ERVK-9P63128 1117 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 KCNJ2P63252 427 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 PLCL1Q15111 1095 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 ZIK1Q3SY52 487 aaPredicted RBP14.16□□□□□ -0.14
TARDBP-201ENST00000240185 SV2CQ496J9 727 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 ATF7IP2Q5U623 682 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 RASSF6Q6ZTQ3 369 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 YAF2Q8IY57 180 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 CAMKK1Q8N5S9 505 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 AENQ8WTP8 325 aaKnown RBP14.16□□□□□ -0.14
TARDBP-201ENST00000240185 PROX1Q92786 737 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 TBC1D10AQ9BXI6 508 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 KCNK4Q9NYG8 393 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 TELO2Q9Y4R8 837 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 PNPLA7Q6ZV29 1317 aa14.16□□□□□ -0.14
TARDBP-201ENST00000240185 KATNA1O75449 491 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 GLP2RO95838 553 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 FDX1P10109 184 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 GZMAP12544 262 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 RRM1P23921 792 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 GP5P40197 560 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 BAG6P46379 1132 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 NPY2RP49146 381 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 DHDDSQ86SQ9 333 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 ACTL9Q8TC94 416 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 MID1IP1Q9NPA3 183 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 FBXO28Q9NVF7 368 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 DSEQ9UL01 958 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 PCDHGA3Q9Y5H0 932 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 AREL1O15033 823 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 SNX3O60493 162 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 CYP11B1P15538 503 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 RPA1P27694 616 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 PRKAA2P54646 552 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 FRG1Q14331 258 aaKnown RBP14.15□□□□□ -0.14
TARDBP-201ENST00000240185 SLC5A5Q92911 643 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 KIAA1683Q9H0B3 1180 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 SLC9A8Q9Y2E8 581 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 OPLAHO14841 1288 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 TFECO14948 347 aaPredicted RBP14.15□□□□□ -0.14
TARDBP-201ENST00000240185 PROSCO94903 275 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 SSTR1P30872 391 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 GALK1P51570 392 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 CCDC157Q569K6 752 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 C10orf120Q5SQS8 335 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.15□□□□□ -0.14
TARDBP-201ENST00000240185 MMP19Q99542 508 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 TBCDQ9BTW9 1192 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 FICDQ9BVA6 458 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 TRMT13Q9NUP7 481 aaKnown RBP14.15□□□□□ -0.14
TARDBP-201ENST00000240185 GALNT8Q9NY28 637 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 NINJ2Q9NZG7 142 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 IGSF9BQ9UPX0 1349 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 CDC40O60508 579 aaKnown RBP eCLIP14.15□□□□□ -0.145e-6■■□□□ 12.3
TARDBP-201ENST00000240185 TXNP10599 105 aaKnown RBP14.15□□□□□ -0.14
TARDBP-201ENST00000240185 CD44P16070 742 aaKnown RBP14.15□□□□□ -0.14
TARDBP-201ENST00000240185 RPL21P46778 160 aaKnown RBP14.15□□□□□ -0.14
TARDBP-201ENST00000240185 ACLYP53396 1101 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 OLFML2AQ68BL7 652 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 POMGNT2Q8NAT1 580 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 TATDN2Q93075 761 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 DGCR14Q96DF8 476 aaKnown RBP14.15□□□□□ -0.14
TARDBP-201ENST00000240185 RPRD1AQ96P16 312 aaPredicted RBP14.15□□□□□ -0.14
TARDBP-201ENST00000240185 ARHGAP20Q9P2F6 1191 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 PHF11Q9UIL8 331 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 PREX2Q70Z35 1606 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.15□□□□□ -0.141e-7■■■■■ 34.9
TARDBP-201ENST00000240185 MYO5CQ9NQX4 1742 aa14.15□□□□□ -0.14
TARDBP-201ENST00000240185 SLC25A3Q00325 362 aa14.14□□□□□ -0.15
TARDBP-201ENST00000240185 SWT1Q5T5J6 900 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms