RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 RNF157Q96PX1 679 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 FRMD8P1Q9BZ68 369 aaPredicted RBP9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 FAM117AQ9C073 453 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 CDT1Q9H211 546 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 POPDC2Q9HBU9 364 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 BARX2Q9UMQ3 279 aaPredicted RBP9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 HMX2A2RU54 273 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 YBX3P16989 372 aaKnown RBP eCLIP9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZFXP17010 805 aaPredicted RBP9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZNF24P17028 368 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 PROZP22891 400 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZNF143P52747 638 aaPredicted RBP9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 DMPKQ09013 629 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 ATP1A4Q13733 1029 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 TTC39BQ5VTQ0 682 aaPredicted RBP9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 JADE1Q6IE81 842 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 B3GNT6Q6ZMB0 384 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 FAM183BPQ6ZVS7 135 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 PQLC3Q8N755 202 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 TMEM176AQ96HP8 235 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 C12orf42Q96LP6 360 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 EBF4Q9BQW3 602 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 NGRNQ9NPE2 291 aaKnown RBP9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 ASNSD1Q9NWL6 643 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 UBAP1Q9NZ09 502 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 SLC17A6Q9P2U8 582 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZNF112Q9UJU3 913 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 PLLPQ9Y342 182 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 DCAF8L1A6NGE4 600 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 C2CD4BA6NLJ0 364 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 CILPO75339 1184 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 PEX2P28328 305 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 GRIA2P42262 883 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 SERPINB8P50452 374 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 TSPY1Q01534 308 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 PDK3Q15120 406 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 ANGEL2Q5VTE6 544 aaKnown RBP9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 EXOC8Q8IYI6 725 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 NETO2Q8NC67 525 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 RBM15BQ8NDT2 890 aaKnown RBP9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 DNERQ8NFT8 737 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 PPP1R14CQ8TAE6 165 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 MMP19Q99542 508 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 TUT1Q9H6E5 874 aaKnown RBP9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 ARMC7Q9H6L4 198 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 HOXC10Q9NYD6 342 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 LOC100653049A0A140TA62 436 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 SLC15A5A6NIM6 579 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 ACKR2O00590 384 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 HNRNPCL1O60812 293 aaKnown RBP9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 KRT34O76011 436 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 METTL18O95568 372 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 PENKP01210 267 aaPredicted RBP9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 SNRPAP09012 282 aaKnown RBP9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 CCDC166P0CW27 439 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 TFE3P19532 575 aaPredicted RBP9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 GPD1P21695 349 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 AQP5P55064 265 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 PLOD1Q02809 727 aaPredicted RBP9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 SEPT6Q14141 434 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 SFT2D3Q587I9 215 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 PPP6R3Q5H9R7 873 aaPredicted RBP9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 FAM160B1Q5W0V3 765 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 UNC5AQ6ZN44 842 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 PCDH19Q8TAB3 1148 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 CXorf38Q8TB03 319 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 COPS5Q92905 334 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 E2F7Q96AV8 911 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 RPF1Q9H9Y2 349 aaKnown RBP9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 PIH1D1Q9NWS0 290 aaKnown RBP9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 SELENONQ9NZV5 590 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 MAD1L1Q9Y6D9 718 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 CAPN14A8MX76 684 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 SPECC1L-ADORA2AF8WAN1 911 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 SPTLC1O15269 473 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 CHADO15335 359 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 PRPSAP2O60256 369 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 E2F6O75461 281 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 PGK2P07205 417 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 GMPRP36959 345 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 GABRB2P47870 512 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 ATXN1P54253 815 aaKnown RBP9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 SH3BGRP55822 239 aaPredicted RBP9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 KRT81Q14533 505 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 KRT72Q14CN4 511 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 GSTA3Q16772 222 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 CCDC14Q49A88 953 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 TCHHL1Q5QJ38 904 aaPredicted RBP9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 DCAF15Q66K64 600 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 TRIML2Q8N7C3 387 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 ICA1LQ8NDH6 482 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 GIPC3Q8TF64 312 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 GDPD5Q8WTR4 605 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 RPL26L1Q9UNX3 145 aaKnown RBP9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 CAPN8A6NHC0 703 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 C19orf81C9J6K1 198 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 OSBPP22059 807 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 RGS2P41220 211 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms